(19 nodes) Clathrin coat assembly network (Cottoperca gobio)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fcho2	FCH and mu domain containing endocytic adaptor 2. (1016 aa)
	LOC115018632	Phosphatidylinositol-binding clathrin assembly protein-like. (689 aa)
	LOC115017223	Huntingtin-interacting protein 1-related protein-like. (986 aa)
	LOC115007593	F-BAR domain only protein 1-like. (1261 aa)
	LOC115012103	Neuronal vesicle trafficking-associated protein 1-like. (201 aa)
	sgip1	SH3GL interacting endocytic adaptor 1. (940 aa)
	LOC115013804	Huntingtin-interacting protein 1-related protein-like. (1076 aa)
	ENSCGOP00000043837	annotation not available (184 aa)
	LOC115013192	Clathrin heavy chain 1-like. (1684 aa)
	LOC115017313	Clathrin heavy chain 1-like. (1684 aa)
	ENSCGOP00000036465	annotation not available (481 aa)
	cltc	Clathrin heavy chain. (1685 aa)
	LOC115018414	Phosphatidylinositol-binding clathrin assembly protein-like. (726 aa)
	LOC115028938	Clathrin coat assembly protein AP180-like. (583 aa)
	picalm	Phosphatidylinositol binding clathrin assembly protein. (736 aa)
	hip1	Huntingtin interacting protein 1. (1047 aa)
	LOC115019460	Neuronal vesicle trafficking-associated protein 2-like. (175 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (185 aa)
	dab2	DAB adaptor protein 2. (781 aa)

Your Current Organism:

Cottoperca gobio

NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCGOP00000036465	ENSCGOP00000043837	ENSCGOP00000036465	ENSCGOP00000043837	annotation not available	annotation not available	0.611
ENSCGOP00000036465	LOC115007593	ENSCGOP00000036465	ENSCGOP00000006408	annotation not available	F-BAR domain only protein 1-like.	0.611
ENSCGOP00000036465	LOC115013192	ENSCGOP00000036465	ENSCGOP00000039335	annotation not available	Clathrin heavy chain 1-like.	0.798
ENSCGOP00000036465	LOC115013804	ENSCGOP00000036465	ENSCGOP00000042430	annotation not available	Huntingtin-interacting protein 1-related protein-like.	0.790
ENSCGOP00000036465	LOC115017223	ENSCGOP00000036465	ENSCGOP00000011202	annotation not available	Huntingtin-interacting protein 1-related protein-like.	0.762
ENSCGOP00000036465	LOC115017313	ENSCGOP00000036465	ENSCGOP00000033359	annotation not available	Clathrin heavy chain 1-like.	0.798
ENSCGOP00000036465	cltc	ENSCGOP00000036465	ENSCGOP00000038060	annotation not available	Clathrin heavy chain.	0.798
ENSCGOP00000036465	dab2	ENSCGOP00000036465	ENSCGOP00000050602	annotation not available	DAB adaptor protein 2.	0.751
ENSCGOP00000036465	fcho2	ENSCGOP00000036465	ENSCGOP00000055210	annotation not available	FCH and mu domain containing endocytic adaptor 2.	0.611
ENSCGOP00000036465	hip1	ENSCGOP00000036465	ENSCGOP00000023119	annotation not available	Huntingtin interacting protein 1.	0.780
ENSCGOP00000036465	sgip1	ENSCGOP00000036465	ENSCGOP00000000374	annotation not available	SH3GL interacting endocytic adaptor 1.	0.611
ENSCGOP00000043837	ENSCGOP00000036465	ENSCGOP00000043837	ENSCGOP00000036465	annotation not available	annotation not available	0.611
ENSCGOP00000043837	LOC115013192	ENSCGOP00000043837	ENSCGOP00000039335	annotation not available	Clathrin heavy chain 1-like.	0.721
ENSCGOP00000043837	LOC115013804	ENSCGOP00000043837	ENSCGOP00000042430	annotation not available	Huntingtin-interacting protein 1-related protein-like.	0.564
ENSCGOP00000043837	LOC115017223	ENSCGOP00000043837	ENSCGOP00000011202	annotation not available	Huntingtin-interacting protein 1-related protein-like.	0.487
ENSCGOP00000043837	LOC115017313	ENSCGOP00000043837	ENSCGOP00000033359	annotation not available	Clathrin heavy chain 1-like.	0.729
ENSCGOP00000043837	LOC115018414	ENSCGOP00000043837	ENSCGOP00000024424	annotation not available	Phosphatidylinositol-binding clathrin assembly protein-like.	0.611
ENSCGOP00000043837	LOC115018632	ENSCGOP00000043837	ENSCGOP00000011651	annotation not available	Phosphatidylinositol-binding clathrin assembly protein-like.	0.611
ENSCGOP00000043837	LOC115028938	ENSCGOP00000043837	ENSCGOP00000031291	annotation not available	Clathrin coat assembly protein AP180-like.	0.611
ENSCGOP00000043837	cltc	ENSCGOP00000043837	ENSCGOP00000038060	annotation not available	Clathrin heavy chain.	0.721