STRINGSTRING
ccdc12 ccdc12 LOC115005498 LOC115005498 ccdc130 ccdc130 DHX15 DHX15 syf2 syf2 crnkl1 crnkl1 tfip11 tfip11 myef2 myef2 xab2 xab2 hnrnpm hnrnpm LOC115023589 LOC115023589 LOC115005997 LOC115005997 cwf19l2 cwf19l2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccdc12Coiled-coil domain containing 12. (176 aa)
LOC115005498Coiled-coil domain-containing protein 130 homolog. (402 aa)
ccdc130Coiled-coil domain containing 130. (393 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (765 aa)
syf2SYF2 pre-mRNA splicing factor. (233 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (838 aa)
tfip11Tuftelin interacting protein 11. (831 aa)
myef2Myelin expression factor 2. (543 aa)
xab2XPA binding protein 2. (829 aa)
hnrnpmHeterogeneous nuclear ribonucleoprotein M. (665 aa)
LOC115023589pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like. (730 aa)
LOC115005997CWF19-like protein 1. (1058 aa)
cwf19l2CWF19 like cell cycle control factor 2. (1024 aa)
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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