(11 nodes) Mixed, incl. T cell costimulation, and Response to protozoan network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000005612	HERV-H LTR-associating 2a, tandem duplicate 2. (326 aa)
	LOC110002820	Uncharacterized protein. (303 aa)
	cd276	CD276 molecule. (340 aa)
	vtcn1	V-set domain containing T cell activation inhibitor 1. (273 aa)
	LOC114921757	Uncharacterized protein. (365 aa)
	ENSLBEP00000021852	Ig-like domain-containing protein. (282 aa)
	ENSLBEP00000023755	Uncharacterized protein. (341 aa)
	ENSLBEP00000023873	Uncharacterized protein. (629 aa)
	ENSLBEP00000028018	Uncharacterized protein. (363 aa)
	LOC109981198	Uncharacterized protein. (506 aa)
	LOC114921953	Uncharacterized protein. (360 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000005612	LOC109981198	ENSLBEP00000005612	ENSLBEP00000031789	HERV-H LTR-associating 2a, tandem duplicate 2.	Uncharacterized protein.	0.789
ENSLBEP00000005612	cd276	ENSLBEP00000005612	ENSLBEP00000012702	HERV-H LTR-associating 2a, tandem duplicate 2.	CD276 molecule.	0.638
ENSLBEP00000005612	vtcn1	ENSLBEP00000005612	ENSLBEP00000017599	HERV-H LTR-associating 2a, tandem duplicate 2.	V-set domain containing T cell activation inhibitor 1.	0.515
ENSLBEP00000021852	LOC109981198	ENSLBEP00000021852	ENSLBEP00000031789	Ig-like domain-containing protein.	Uncharacterized protein.	0.613
ENSLBEP00000021852	cd276	ENSLBEP00000021852	ENSLBEP00000012702	Ig-like domain-containing protein.	CD276 molecule.	0.704
ENSLBEP00000023755	LOC109981198	ENSLBEP00000023755	ENSLBEP00000031789	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSLBEP00000023755	cd276	ENSLBEP00000023755	ENSLBEP00000012702	Uncharacterized protein.	CD276 molecule.	0.638
ENSLBEP00000023755	vtcn1	ENSLBEP00000023755	ENSLBEP00000017599	Uncharacterized protein.	V-set domain containing T cell activation inhibitor 1.	0.515
ENSLBEP00000023873	LOC109981198	ENSLBEP00000023873	ENSLBEP00000031789	Uncharacterized protein.	Uncharacterized protein.	0.613
ENSLBEP00000023873	cd276	ENSLBEP00000023873	ENSLBEP00000012702	Uncharacterized protein.	CD276 molecule.	0.704
ENSLBEP00000028018	LOC109981198	ENSLBEP00000028018	ENSLBEP00000031789	Uncharacterized protein.	Uncharacterized protein.	0.789
ENSLBEP00000028018	cd276	ENSLBEP00000028018	ENSLBEP00000012702	Uncharacterized protein.	CD276 molecule.	0.638
ENSLBEP00000028018	vtcn1	ENSLBEP00000028018	ENSLBEP00000017599	Uncharacterized protein.	V-set domain containing T cell activation inhibitor 1.	0.515
LOC109981198	ENSLBEP00000005612	ENSLBEP00000031789	ENSLBEP00000005612	Uncharacterized protein.	HERV-H LTR-associating 2a, tandem duplicate 2.	0.789
LOC109981198	ENSLBEP00000021852	ENSLBEP00000031789	ENSLBEP00000021852	Uncharacterized protein.	Ig-like domain-containing protein.	0.613
LOC109981198	ENSLBEP00000023755	ENSLBEP00000031789	ENSLBEP00000023755	Uncharacterized protein.	Uncharacterized protein.	0.789
LOC109981198	ENSLBEP00000023873	ENSLBEP00000031789	ENSLBEP00000023873	Uncharacterized protein.	Uncharacterized protein.	0.613
LOC109981198	ENSLBEP00000028018	ENSLBEP00000031789	ENSLBEP00000028018	Uncharacterized protein.	Uncharacterized protein.	0.789
LOC109981198	LOC110002820	ENSLBEP00000031789	ENSLBEP00000007053	Uncharacterized protein.	Uncharacterized protein.	0.613
LOC109981198	LOC114921757	ENSLBEP00000031789	ENSLBEP00000017928	Uncharacterized protein.	Uncharacterized protein.	0.789