(28 nodes) Protein-lipid complex remodeling, and Vitellogenin, N-terminal network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109996288	Uncharacterized protein. (84 aa)
	LOC109996289	Apolipoprotein Eb. (276 aa)
	LOC109996310	Uncharacterized protein. (247 aa)
	LOC109996309	Uncharacterized protein. (321 aa)
	LOC109996308	Uncharacterized protein. (301 aa)
	sorl1	Sortilin-related receptor, L(DLR class) A repeats containing. (1974 aa)
	LOC109989500	Apolipoprotein Ba. (4238 aa)
	ENSLBEP00000010726	Uncharacterized protein. (616 aa)
	lcat	Lecithin-cholesterol acyltransferase. (434 aa)
	LOC109980354	Uncharacterized protein; Belongs to the CD36 family. (430 aa)
	sorcs2	Sortilin-related VPS10 domain containing receptor 2. (1128 aa)
	LOC109991911	Uncharacterized protein. (261 aa)
	LOC109977272	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (467 aa)
	ENSLBEP00000021349	BPI1 domain-containing protein. (456 aa)
	LOC109990231	Uncharacterized protein. (251 aa)
	LOC109975219	Uncharacterized protein. (251 aa)
	apof	Apolipoprotein F. (442 aa)
	LOC109989657	Vitellogenin domain-containing protein. (789 aa)
	ENSLBEP00000026611	Uncharacterized protein. (448 aa)
	LOC109989658	Vitellogenin domain-containing protein. (2351 aa)
	ENSLBEP00000026791	Vitellogenin domain-containing protein. (736 aa)
	mttp	Microsomal triglyceride transfer protein. (885 aa)
	LOC110000801	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (474 aa)
	LOC109987980	Vitellogenin 3, phosvitinless. (1263 aa)
	APP	Amyloid beta precursor protein. (646 aa)
	LOC109995049	Uncharacterized protein. (1596 aa)
	LOC109995053	Uncharacterized protein. (1583 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (429 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APP	LOC109975219	ENSLBEP00000033207	ENSLBEP00000023316	Amyloid beta precursor protein.	Uncharacterized protein.	0.721
APP	LOC109980354	ENSLBEP00000033207	ENSLBEP00000013933	Amyloid beta precursor protein.	Uncharacterized protein; Belongs to the CD36 family.	0.423
APP	LOC109990231	ENSLBEP00000033207	ENSLBEP00000022171	Amyloid beta precursor protein.	Uncharacterized protein.	0.721
APP	LOC109991911	ENSLBEP00000033207	ENSLBEP00000016221	Amyloid beta precursor protein.	Uncharacterized protein.	0.437
APP	LOC109996289	ENSLBEP00000033207	ENSLBEP00000001932	Amyloid beta precursor protein.	Apolipoprotein Eb.	0.658
APP	LOC109996308	ENSLBEP00000033207	ENSLBEP00000002003	Amyloid beta precursor protein.	Uncharacterized protein.	0.521
APP	LOC109996309	ENSLBEP00000033207	ENSLBEP00000001987	Amyloid beta precursor protein.	Uncharacterized protein.	0.521
APP	LOC109996310	ENSLBEP00000033207	ENSLBEP00000001959	Amyloid beta precursor protein.	Uncharacterized protein.	0.521
APP	scarb1	ENSLBEP00000033207	ENSLBEP00000037100	Amyloid beta precursor protein.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.423
APP	sorcs2	ENSLBEP00000033207	ENSLBEP00000015266	Amyloid beta precursor protein.	Sortilin-related VPS10 domain containing receptor 2.	0.439
APP	sorl1	ENSLBEP00000033207	ENSLBEP00000004208	Amyloid beta precursor protein.	Sortilin-related receptor, L(DLR class) A repeats containing.	0.951
ENSLBEP00000010726	ENSLBEP00000021349	ENSLBEP00000010726	ENSLBEP00000021349	Uncharacterized protein.	BPI1 domain-containing protein.	0.608
ENSLBEP00000010726	LOC109975219	ENSLBEP00000010726	ENSLBEP00000023316	Uncharacterized protein.	Uncharacterized protein.	0.761
ENSLBEP00000010726	LOC109977272	ENSLBEP00000010726	ENSLBEP00000020928	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.608
ENSLBEP00000010726	LOC109980354	ENSLBEP00000010726	ENSLBEP00000013933	Uncharacterized protein.	Uncharacterized protein; Belongs to the CD36 family.	0.549
ENSLBEP00000010726	LOC109990231	ENSLBEP00000010726	ENSLBEP00000022171	Uncharacterized protein.	Uncharacterized protein.	0.761
ENSLBEP00000010726	LOC109991911	ENSLBEP00000010726	ENSLBEP00000016221	Uncharacterized protein.	Uncharacterized protein.	0.860
ENSLBEP00000010726	LOC109996288	ENSLBEP00000010726	ENSLBEP00000001881	Uncharacterized protein.	Uncharacterized protein.	0.542
ENSLBEP00000010726	LOC109996289	ENSLBEP00000010726	ENSLBEP00000001932	Uncharacterized protein.	Apolipoprotein Eb.	0.780
ENSLBEP00000010726	LOC109996308	ENSLBEP00000010726	ENSLBEP00000002003	Uncharacterized protein.	Uncharacterized protein.	0.851