(13 nodes) Mixed, incl. Interleukin-15 signaling, and Short hematopoietin receptor, family 1, conserved site network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109997986	Epstein-Barr virus induced 3. (242 aa)
	LOC109998596	Uncharacterized protein. (905 aa)
	il6r	Interleukin 6 receptor. (592 aa)
	ENSLBEP00000013630	IL2RB_N1 domain-containing protein. (476 aa)
	LOC109996985	Uncharacterized protein. (712 aa)
	mss51	MYND-type domain-containing protein. (429 aa)
	LOC109980451	Fibronectin type-III domain-containing protein. (694 aa)
	LOC109980076	Uncharacterized protein. (228 aa)
	ENSLBEP00000024646	OTU domain-containing protein. (528 aa)
	LOC109976443	Interleukin-27 subunit beta-like. (242 aa)
	il7r	Fibronectin type-III domain-containing protein. (421 aa)
	LOC109986302	Uncharacterized protein. (819 aa)
	LOC110002688	Interleukin; Belongs to the IL-15/IL-21 family. (128 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000013630	ENSLBEP00000024646	ENSLBEP00000013630	ENSLBEP00000024646	IL2RB_N1 domain-containing protein.	OTU domain-containing protein.	0.985
ENSLBEP00000013630	LOC109976443	ENSLBEP00000013630	ENSLBEP00000025095	IL2RB_N1 domain-containing protein.	Interleukin-27 subunit beta-like.	0.601
ENSLBEP00000013630	LOC109980076	ENSLBEP00000013630	ENSLBEP00000023334	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.993
ENSLBEP00000013630	LOC109980451	ENSLBEP00000013630	ENSLBEP00000018709	IL2RB_N1 domain-containing protein.	Fibronectin type-III domain-containing protein.	0.739
ENSLBEP00000013630	LOC109986302	ENSLBEP00000013630	ENSLBEP00000026365	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.936
ENSLBEP00000013630	LOC109996985	ENSLBEP00000013630	ENSLBEP00000014195	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.867
ENSLBEP00000013630	LOC109997986	ENSLBEP00000013630	ENSLBEP00000005146	IL2RB_N1 domain-containing protein.	Epstein-Barr virus induced 3.	0.601
ENSLBEP00000013630	LOC109998596	ENSLBEP00000013630	ENSLBEP00000006769	IL2RB_N1 domain-containing protein.	Uncharacterized protein.	0.546
ENSLBEP00000013630	LOC110002688	ENSLBEP00000013630	ENSLBEP00000030834	IL2RB_N1 domain-containing protein.	Interleukin; Belongs to the IL-15/IL-21 family.	0.992
ENSLBEP00000013630	il6r	ENSLBEP00000013630	ENSLBEP00000007297	IL2RB_N1 domain-containing protein.	Interleukin 6 receptor.	0.868
ENSLBEP00000013630	il7r	ENSLBEP00000013630	ENSLBEP00000025663	IL2RB_N1 domain-containing protein.	Fibronectin type-III domain-containing protein.	0.934
ENSLBEP00000013630	mss51	ENSLBEP00000013630	ENSLBEP00000017626	IL2RB_N1 domain-containing protein.	MYND-type domain-containing protein.	0.451
ENSLBEP00000024646	ENSLBEP00000013630	ENSLBEP00000024646	ENSLBEP00000013630	OTU domain-containing protein.	IL2RB_N1 domain-containing protein.	0.985
ENSLBEP00000024646	LOC109980076	ENSLBEP00000024646	ENSLBEP00000023334	OTU domain-containing protein.	Uncharacterized protein.	0.934
ENSLBEP00000024646	LOC109986302	ENSLBEP00000024646	ENSLBEP00000026365	OTU domain-containing protein.	Uncharacterized protein.	0.812
ENSLBEP00000024646	LOC110002688	ENSLBEP00000024646	ENSLBEP00000030834	OTU domain-containing protein.	Interleukin; Belongs to the IL-15/IL-21 family.	0.934
ENSLBEP00000024646	il7r	ENSLBEP00000024646	ENSLBEP00000025663	OTU domain-containing protein.	Fibronectin type-III domain-containing protein.	0.812
ENSLBEP00000024646	mss51	ENSLBEP00000024646	ENSLBEP00000017626	OTU domain-containing protein.	MYND-type domain-containing protein.	0.498
LOC109976443	ENSLBEP00000013630	ENSLBEP00000025095	ENSLBEP00000013630	Interleukin-27 subunit beta-like.	IL2RB_N1 domain-containing protein.	0.601
LOC109976443	LOC109980076	ENSLBEP00000025095	ENSLBEP00000023334	Interleukin-27 subunit beta-like.	Uncharacterized protein.	0.654