(12 nodes) Linker histone H1/H5, and CIDE-N domain network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hp1bp3	Heterochromatin protein 1, binding protein 3. (631 aa)
	ENSLBEP00000013333	annotation not available (96 aa)
	LOC109986783	H1 histone family, member 0. (199 aa)
	ENSLBEP00000021315	H15 domain-containing protein. (96 aa)
	LOC109994852	Si:ch211-103n10.5. (187 aa)
	ENSLBEP00000022806	HMG box domain-containing protein. (118 aa)
	ENSLBEP00000025505	H15 domain-containing protein. (181 aa)
	dffb	DNA fragmentation factor, beta polypeptide (caspase-activated DNase). (346 aa)
	ENSLBEP00000026274	H15 domain-containing protein. (132 aa)
	ENSLBEP00000026702	H15 domain-containing protein. (125 aa)
	ENSLBEP00000027622	H15 domain-containing protein. (163 aa)
	ENSLBEP00000029859	H15 domain-containing protein. (150 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000013333	ENSLBEP00000027622	ENSLBEP00000013333	ENSLBEP00000027622	annotation not available	H15 domain-containing protein.	0.407
ENSLBEP00000013333	ENSLBEP00000029859	ENSLBEP00000013333	ENSLBEP00000029859	annotation not available	H15 domain-containing protein.	0.407
ENSLBEP00000013333	LOC109986783	ENSLBEP00000013333	ENSLBEP00000020564	annotation not available	H1 histone family, member 0.	0.666
ENSLBEP00000013333	hp1bp3	ENSLBEP00000013333	ENSLBEP00000008221	annotation not available	Heterochromatin protein 1, binding protein 3.	0.602
ENSLBEP00000021315	ENSLBEP00000022806	ENSLBEP00000021315	ENSLBEP00000022806	H15 domain-containing protein.	HMG box domain-containing protein.	0.466
ENSLBEP00000021315	LOC109986783	ENSLBEP00000021315	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000021315	dffb	ENSLBEP00000021315	ENSLBEP00000025846	H15 domain-containing protein.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.598
ENSLBEP00000021315	hp1bp3	ENSLBEP00000021315	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
ENSLBEP00000022806	ENSLBEP00000021315	ENSLBEP00000022806	ENSLBEP00000021315	HMG box domain-containing protein.	H15 domain-containing protein.	0.466
ENSLBEP00000022806	ENSLBEP00000025505	ENSLBEP00000022806	ENSLBEP00000025505	HMG box domain-containing protein.	H15 domain-containing protein.	0.466
ENSLBEP00000022806	ENSLBEP00000026274	ENSLBEP00000022806	ENSLBEP00000026274	HMG box domain-containing protein.	H15 domain-containing protein.	0.466
ENSLBEP00000022806	ENSLBEP00000026702	ENSLBEP00000022806	ENSLBEP00000026702	HMG box domain-containing protein.	H15 domain-containing protein.	0.466
ENSLBEP00000022806	LOC109986783	ENSLBEP00000022806	ENSLBEP00000020564	HMG box domain-containing protein.	H1 histone family, member 0.	0.633
ENSLBEP00000022806	LOC109994852	ENSLBEP00000022806	ENSLBEP00000021380	HMG box domain-containing protein.	Si:ch211-103n10.5.	0.466
ENSLBEP00000022806	dffb	ENSLBEP00000022806	ENSLBEP00000025846	HMG box domain-containing protein.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.530
ENSLBEP00000022806	hp1bp3	ENSLBEP00000022806	ENSLBEP00000008221	HMG box domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
ENSLBEP00000025505	ENSLBEP00000022806	ENSLBEP00000025505	ENSLBEP00000022806	H15 domain-containing protein.	HMG box domain-containing protein.	0.466
ENSLBEP00000025505	LOC109986783	ENSLBEP00000025505	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000025505	dffb	ENSLBEP00000025505	ENSLBEP00000025846	H15 domain-containing protein.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.598
ENSLBEP00000025505	hp1bp3	ENSLBEP00000025505	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510