(10 nodes) Shelterin complex network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109988732	TERF1 (TRF1)-interacting nuclear factor 2. (557 aa)
	pot1	Protection of telomeres 1 homolog. (718 aa)
	ENSLBEP00000005132	Telo_bind domain-containing protein. (305 aa)
	ENSLBEP00000006855	HTH myb-type domain-containing protein. (181 aa)
	ENSLBEP00000006873	Uncharacterized protein. (125 aa)
	LOC109989819	Uncharacterized protein. (448 aa)
	terf1	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (370 aa)
	dclre1b	DNA cross-link repair 1B. (612 aa)
	tert	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1108 aa)
	terf2ip	Uncharacterized protein. (736 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000005132	ENSLBEP00000006855	ENSLBEP00000005132	ENSLBEP00000006855	Telo_bind domain-containing protein.	HTH myb-type domain-containing protein.	0.936
ENSLBEP00000005132	ENSLBEP00000006873	ENSLBEP00000005132	ENSLBEP00000006873	Telo_bind domain-containing protein.	Uncharacterized protein.	0.972
ENSLBEP00000005132	LOC109988732	ENSLBEP00000005132	ENSLBEP00000001787	Telo_bind domain-containing protein.	TERF1 (TRF1)-interacting nuclear factor 2.	0.986
ENSLBEP00000005132	LOC109989819	ENSLBEP00000005132	ENSLBEP00000009703	Telo_bind domain-containing protein.	Uncharacterized protein.	0.986
ENSLBEP00000005132	dclre1b	ENSLBEP00000005132	ENSLBEP00000020248	Telo_bind domain-containing protein.	DNA cross-link repair 1B.	0.536
ENSLBEP00000005132	terf1	ENSLBEP00000005132	ENSLBEP00000019249	Telo_bind domain-containing protein.	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.	0.970
ENSLBEP00000005132	terf2ip	ENSLBEP00000005132	ENSLBEP00000033300	Telo_bind domain-containing protein.	Uncharacterized protein.	0.969
ENSLBEP00000005132	tert	ENSLBEP00000005132	ENSLBEP00000031507	Telo_bind domain-containing protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.977
ENSLBEP00000006855	ENSLBEP00000005132	ENSLBEP00000006855	ENSLBEP00000005132	HTH myb-type domain-containing protein.	Telo_bind domain-containing protein.	0.936
ENSLBEP00000006855	LOC109989819	ENSLBEP00000006855	ENSLBEP00000009703	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.979
ENSLBEP00000006855	dclre1b	ENSLBEP00000006855	ENSLBEP00000020248	HTH myb-type domain-containing protein.	DNA cross-link repair 1B.	0.855
ENSLBEP00000006855	pot1	ENSLBEP00000006855	ENSLBEP00000004711	HTH myb-type domain-containing protein.	Protection of telomeres 1 homolog.	0.936
ENSLBEP00000006855	terf1	ENSLBEP00000006855	ENSLBEP00000019249	HTH myb-type domain-containing protein.	Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.	0.875
ENSLBEP00000006855	terf2ip	ENSLBEP00000006855	ENSLBEP00000033300	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.986
ENSLBEP00000006855	tert	ENSLBEP00000006855	ENSLBEP00000031507	HTH myb-type domain-containing protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.649
ENSLBEP00000006873	ENSLBEP00000005132	ENSLBEP00000006873	ENSLBEP00000005132	Uncharacterized protein.	Telo_bind domain-containing protein.	0.972
ENSLBEP00000006873	LOC109988732	ENSLBEP00000006873	ENSLBEP00000001787	Uncharacterized protein.	TERF1 (TRF1)-interacting nuclear factor 2.	0.992
ENSLBEP00000006873	LOC109989819	ENSLBEP00000006873	ENSLBEP00000009703	Uncharacterized protein.	Uncharacterized protein.	0.986
ENSLBEP00000006873	dclre1b	ENSLBEP00000006873	ENSLBEP00000020248	Uncharacterized protein.	DNA cross-link repair 1B.	0.972
ENSLBEP00000006873	pot1	ENSLBEP00000006873	ENSLBEP00000004711	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.972