(5 nodes) Shelterin complex network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109988732	TERF1 (TRF1)-interacting nuclear factor 2. (557 aa)
	pot1	Protection of telomeres 1 homolog. (718 aa)
	ENSLBEP00000006873	Uncharacterized protein. (125 aa)
	LOC109989819	Uncharacterized protein. (448 aa)
	terf2ip	Uncharacterized protein. (736 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000006873	LOC109988732	ENSLBEP00000006873	ENSLBEP00000001787	Uncharacterized protein.	TERF1 (TRF1)-interacting nuclear factor 2.	0.992
ENSLBEP00000006873	LOC109989819	ENSLBEP00000006873	ENSLBEP00000009703	Uncharacterized protein.	Uncharacterized protein.	0.986
ENSLBEP00000006873	pot1	ENSLBEP00000006873	ENSLBEP00000004711	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.972
ENSLBEP00000006873	terf2ip	ENSLBEP00000006873	ENSLBEP00000033300	Uncharacterized protein.	Uncharacterized protein.	0.994
LOC109988732	ENSLBEP00000006873	ENSLBEP00000001787	ENSLBEP00000006873	TERF1 (TRF1)-interacting nuclear factor 2.	Uncharacterized protein.	0.992
LOC109988732	LOC109989819	ENSLBEP00000001787	ENSLBEP00000009703	TERF1 (TRF1)-interacting nuclear factor 2.	Uncharacterized protein.	0.996
LOC109988732	pot1	ENSLBEP00000001787	ENSLBEP00000004711	TERF1 (TRF1)-interacting nuclear factor 2.	Protection of telomeres 1 homolog.	0.986
LOC109988732	terf2ip	ENSLBEP00000001787	ENSLBEP00000033300	TERF1 (TRF1)-interacting nuclear factor 2.	Uncharacterized protein.	0.983
LOC109989819	ENSLBEP00000006873	ENSLBEP00000009703	ENSLBEP00000006873	Uncharacterized protein.	Uncharacterized protein.	0.986
LOC109989819	LOC109988732	ENSLBEP00000009703	ENSLBEP00000001787	Uncharacterized protein.	TERF1 (TRF1)-interacting nuclear factor 2.	0.996
LOC109989819	pot1	ENSLBEP00000009703	ENSLBEP00000004711	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.986
LOC109989819	terf2ip	ENSLBEP00000009703	ENSLBEP00000033300	Uncharacterized protein.	Uncharacterized protein.	0.983
pot1	ENSLBEP00000006873	ENSLBEP00000004711	ENSLBEP00000006873	Protection of telomeres 1 homolog.	Uncharacterized protein.	0.972
pot1	LOC109988732	ENSLBEP00000004711	ENSLBEP00000001787	Protection of telomeres 1 homolog.	TERF1 (TRF1)-interacting nuclear factor 2.	0.986
pot1	LOC109989819	ENSLBEP00000004711	ENSLBEP00000009703	Protection of telomeres 1 homolog.	Uncharacterized protein.	0.986
pot1	terf2ip	ENSLBEP00000004711	ENSLBEP00000033300	Protection of telomeres 1 homolog.	Uncharacterized protein.	0.969
terf2ip	ENSLBEP00000006873	ENSLBEP00000033300	ENSLBEP00000006873	Uncharacterized protein.	Uncharacterized protein.	0.994
terf2ip	LOC109988732	ENSLBEP00000033300	ENSLBEP00000001787	Uncharacterized protein.	TERF1 (TRF1)-interacting nuclear factor 2.	0.983
terf2ip	LOC109989819	ENSLBEP00000033300	ENSLBEP00000009703	Uncharacterized protein.	Uncharacterized protein.	0.983
terf2ip	pot1	ENSLBEP00000033300	ENSLBEP00000004711	Uncharacterized protein.	Protection of telomeres 1 homolog.	0.969