(6 nodes) Mixed, incl. Zinc finger protein 750, and Cellularization cleavage furrow network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	prr35	Si:ch211-248l17.3. (739 aa)
	kbtbd12	Kelch repeat and BTB (POZ) domain containing 12. (620 aa)
	klhdc8b	Kelch domain containing 8B. (359 aa)
	ccdc36	Uncharacterized protein. (434 aa)
	pkdcc	Protein kinase domain containing, cytoplasmic b. (480 aa)
	ENSLBEP00000033684	Uncharacterized protein. (1165 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000033684	kbtbd12	ENSLBEP00000033684	ENSLBEP00000026177	Uncharacterized protein.	Kelch repeat and BTB (POZ) domain containing 12.	0.551
ENSLBEP00000033684	klhdc8b	ENSLBEP00000033684	ENSLBEP00000026193	Uncharacterized protein.	Kelch domain containing 8B.	0.549
ENSLBEP00000033684	pkdcc	ENSLBEP00000033684	ENSLBEP00000028513	Uncharacterized protein.	Protein kinase domain containing, cytoplasmic b.	0.410
ENSLBEP00000033684	prr35	ENSLBEP00000033684	ENSLBEP00000018579	Uncharacterized protein.	Si:ch211-248l17.3.	0.553
ccdc36	kbtbd12	ENSLBEP00000026206	ENSLBEP00000026177	Uncharacterized protein.	Kelch repeat and BTB (POZ) domain containing 12.	0.554
ccdc36	pkdcc	ENSLBEP00000026206	ENSLBEP00000028513	Uncharacterized protein.	Protein kinase domain containing, cytoplasmic b.	0.478
ccdc36	prr35	ENSLBEP00000026206	ENSLBEP00000018579	Uncharacterized protein.	Si:ch211-248l17.3.	0.555
kbtbd12	ENSLBEP00000033684	ENSLBEP00000026177	ENSLBEP00000033684	Kelch repeat and BTB (POZ) domain containing 12.	Uncharacterized protein.	0.551
kbtbd12	ccdc36	ENSLBEP00000026177	ENSLBEP00000026206	Kelch repeat and BTB (POZ) domain containing 12.	Uncharacterized protein.	0.554
kbtbd12	klhdc8b	ENSLBEP00000026177	ENSLBEP00000026193	Kelch repeat and BTB (POZ) domain containing 12.	Kelch domain containing 8B.	0.518
kbtbd12	pkdcc	ENSLBEP00000026177	ENSLBEP00000028513	Kelch repeat and BTB (POZ) domain containing 12.	Protein kinase domain containing, cytoplasmic b.	0.598
kbtbd12	prr35	ENSLBEP00000026177	ENSLBEP00000018579	Kelch repeat and BTB (POZ) domain containing 12.	Si:ch211-248l17.3.	0.557
klhdc8b	ENSLBEP00000033684	ENSLBEP00000026193	ENSLBEP00000033684	Kelch domain containing 8B.	Uncharacterized protein.	0.549
klhdc8b	kbtbd12	ENSLBEP00000026193	ENSLBEP00000026177	Kelch domain containing 8B.	Kelch repeat and BTB (POZ) domain containing 12.	0.518
klhdc8b	pkdcc	ENSLBEP00000026193	ENSLBEP00000028513	Kelch domain containing 8B.	Protein kinase domain containing, cytoplasmic b.	0.479
klhdc8b	prr35	ENSLBEP00000026193	ENSLBEP00000018579	Kelch domain containing 8B.	Si:ch211-248l17.3.	0.410
pkdcc	ENSLBEP00000033684	ENSLBEP00000028513	ENSLBEP00000033684	Protein kinase domain containing, cytoplasmic b.	Uncharacterized protein.	0.410
pkdcc	ccdc36	ENSLBEP00000028513	ENSLBEP00000026206	Protein kinase domain containing, cytoplasmic b.	Uncharacterized protein.	0.478
pkdcc	kbtbd12	ENSLBEP00000028513	ENSLBEP00000026177	Protein kinase domain containing, cytoplasmic b.	Kelch repeat and BTB (POZ) domain containing 12.	0.598
pkdcc	klhdc8b	ENSLBEP00000028513	ENSLBEP00000026193	Protein kinase domain containing, cytoplasmic b.	Kelch domain containing 8B.	0.479