(8 nodes) Homer family, and Metabotropic glutamate receptor, Homer-binding domain network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HOMER1	Homer scaffold protein 1. (356 aa)
	LOC109977692	Glutamate receptor, metabotropic 1b. (1160 aa)
	LOC109988368	Glutamate receptor, metabotropic 5a. (1146 aa)
	LOC109991965	WH1 domain-containing protein. (363 aa)
	LOC109998752	Homer scaffold protein 1b. (363 aa)
	grm1	Glutamate receptor, metabotropic 1a. (1169 aa)
	homer2	Homer scaffold protein 2. (356 aa)
	homer3	Homer scaffold protein 3b. (360 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HOMER1	LOC109977692	ENSLBEP00000002162	ENSLBEP00000006580	Homer scaffold protein 1.	Glutamate receptor, metabotropic 1b.	0.807
HOMER1	LOC109988368	ENSLBEP00000002162	ENSLBEP00000018403	Homer scaffold protein 1.	Glutamate receptor, metabotropic 5a.	0.807
HOMER1	LOC109991965	ENSLBEP00000002162	ENSLBEP00000019656	Homer scaffold protein 1.	WH1 domain-containing protein.	0.976
HOMER1	grm1	ENSLBEP00000002162	ENSLBEP00000026121	Homer scaffold protein 1.	Glutamate receptor, metabotropic 1a.	0.907
HOMER1	homer2	ENSLBEP00000002162	ENSLBEP00000032529	Homer scaffold protein 1.	Homer scaffold protein 2.	0.859
HOMER1	homer3	ENSLBEP00000002162	ENSLBEP00000037159	Homer scaffold protein 1.	Homer scaffold protein 3b.	0.753
LOC109977692	HOMER1	ENSLBEP00000006580	ENSLBEP00000002162	Glutamate receptor, metabotropic 1b.	Homer scaffold protein 1.	0.807
LOC109977692	LOC109991965	ENSLBEP00000006580	ENSLBEP00000019656	Glutamate receptor, metabotropic 1b.	WH1 domain-containing protein.	0.889
LOC109977692	LOC109998752	ENSLBEP00000006580	ENSLBEP00000019729	Glutamate receptor, metabotropic 1b.	Homer scaffold protein 1b.	0.892
LOC109977692	grm1	ENSLBEP00000006580	ENSLBEP00000026121	Glutamate receptor, metabotropic 1b.	Glutamate receptor, metabotropic 1a.	0.816
LOC109977692	homer2	ENSLBEP00000006580	ENSLBEP00000032529	Glutamate receptor, metabotropic 1b.	Homer scaffold protein 2.	0.849
LOC109977692	homer3	ENSLBEP00000006580	ENSLBEP00000037159	Glutamate receptor, metabotropic 1b.	Homer scaffold protein 3b.	0.753
LOC109988368	HOMER1	ENSLBEP00000018403	ENSLBEP00000002162	Glutamate receptor, metabotropic 5a.	Homer scaffold protein 1.	0.807
LOC109988368	LOC109991965	ENSLBEP00000018403	ENSLBEP00000019656	Glutamate receptor, metabotropic 5a.	WH1 domain-containing protein.	0.889
LOC109988368	LOC109998752	ENSLBEP00000018403	ENSLBEP00000019729	Glutamate receptor, metabotropic 5a.	Homer scaffold protein 1b.	0.892
LOC109988368	grm1	ENSLBEP00000018403	ENSLBEP00000026121	Glutamate receptor, metabotropic 5a.	Glutamate receptor, metabotropic 1a.	0.818
LOC109988368	homer2	ENSLBEP00000018403	ENSLBEP00000032529	Glutamate receptor, metabotropic 5a.	Homer scaffold protein 2.	0.849
LOC109988368	homer3	ENSLBEP00000018403	ENSLBEP00000037159	Glutamate receptor, metabotropic 5a.	Homer scaffold protein 3b.	0.753
LOC109991965	HOMER1	ENSLBEP00000019656	ENSLBEP00000002162	WH1 domain-containing protein.	Homer scaffold protein 1.	0.976
LOC109991965	LOC109977692	ENSLBEP00000019656	ENSLBEP00000006580	WH1 domain-containing protein.	Glutamate receptor, metabotropic 1b.	0.889