(24 nodes) Homeobox protein, antennapedia type, conserved site, and PBC domain network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pbx1	Homeobox domain-containing protein. (449 aa)
	LOC109989918	Homeobox A4. (253 aa)
	LOC109992884	Homeobox domain-containing protein. (284 aa)
	meis1	Meis homeobox 1 b. (399 aa)
	LOC109995921	Homeobox B6b. (235 aa)
	ENSLBEP00000012776	Homeobox B5b. (204 aa)
	hoxc4	Homeobox C4a. (271 aa)
	ENSLBEP00000013234	Homeobox domain-containing protein. (109 aa)
	hoxc6	Homeobox C6a. (235 aa)
	hoxc8	Homeobox C8a. (253 aa)
	hoxc9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (262 aa)
	LOC109998109	Homeobox B13a. (316 aa)
	hoxb9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (280 aa)
	ENSLBEP00000013426	Homeobox B8a. (211 aa)
	LOC109998108	Homeobox B7a. (269 aa)
	LOC109998091	Homeobox domain-containing protein. (280 aa)
	LOC109998090	Homeobox domain-containing protein. (292 aa)
	hoxb4	Homeobox B4a. (239 aa)
	LOC109989589	Homeobox domain-containing protein. (332 aa)
	LOC109991446	PBC domain-containing protein. (117 aa)
	LOC109985524	Pre-B-cell leukemia homeobox 1a. (325 aa)
	LOC109976537	Meis homeobox 2b. (370 aa)
	LOC109997190	Homeobox B3a. (427 aa)
	meis2	Meis homeobox 2a. (499 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000012776	ENSLBEP00000013234	ENSLBEP00000012776	ENSLBEP00000013234	Homeobox B5b.	Homeobox domain-containing protein.	0.732
ENSLBEP00000012776	ENSLBEP00000013426	ENSLBEP00000012776	ENSLBEP00000013426	Homeobox B5b.	Homeobox B8a.	0.521
ENSLBEP00000012776	LOC109985524	ENSLBEP00000012776	ENSLBEP00000025629	Homeobox B5b.	Pre-B-cell leukemia homeobox 1a.	0.776
ENSLBEP00000012776	LOC109989589	ENSLBEP00000012776	ENSLBEP00000017761	Homeobox B5b.	Homeobox domain-containing protein.	0.776
ENSLBEP00000012776	LOC109989918	ENSLBEP00000012776	ENSLBEP00000002165	Homeobox B5b.	Homeobox A4.	0.734
ENSLBEP00000012776	LOC109991446	ENSLBEP00000012776	ENSLBEP00000025510	Homeobox B5b.	PBC domain-containing protein.	0.776
ENSLBEP00000012776	LOC109992884	ENSLBEP00000012776	ENSLBEP00000003162	Homeobox B5b.	Homeobox domain-containing protein.	0.734
ENSLBEP00000012776	LOC109995921	ENSLBEP00000012776	ENSLBEP00000012755	Homeobox B5b.	Homeobox B6b.	0.932
ENSLBEP00000012776	LOC109997190	ENSLBEP00000012776	ENSLBEP00000029505	Homeobox B5b.	Homeobox B3a.	0.816
ENSLBEP00000012776	LOC109998091	ENSLBEP00000012776	ENSLBEP00000013465	Homeobox B5b.	Homeobox domain-containing protein.	0.932
ENSLBEP00000012776	LOC109998108	ENSLBEP00000012776	ENSLBEP00000013448	Homeobox B5b.	Homeobox B7a.	0.938
ENSLBEP00000012776	hoxb4	ENSLBEP00000012776	ENSLBEP00000013547	Homeobox B5b.	Homeobox B4a.	0.926
ENSLBEP00000012776	hoxb9	ENSLBEP00000012776	ENSLBEP00000013394	Homeobox B5b.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.815
ENSLBEP00000012776	hoxc4	ENSLBEP00000012776	ENSLBEP00000013191	Homeobox B5b.	Homeobox C4a.	0.909
ENSLBEP00000012776	hoxc6	ENSLBEP00000012776	ENSLBEP00000013322	Homeobox B5b.	Homeobox C6a.	0.712
ENSLBEP00000012776	hoxc8	ENSLBEP00000012776	ENSLBEP00000013335	Homeobox B5b.	Homeobox C8a.	0.565
ENSLBEP00000012776	hoxc9	ENSLBEP00000012776	ENSLBEP00000013347	Homeobox B5b.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.552
ENSLBEP00000012776	meis1	ENSLBEP00000012776	ENSLBEP00000010910	Homeobox B5b.	Meis homeobox 1 b.	0.411
ENSLBEP00000012776	meis2	ENSLBEP00000012776	ENSLBEP00000037985	Homeobox B5b.	Meis homeobox 2a.	0.411
ENSLBEP00000012776	pbx1	ENSLBEP00000012776	ENSLBEP00000001096	Homeobox B5b.	Homeobox domain-containing protein.	0.776