(29 nodes) Oligosaccharyltransferase complex, and Cotranslational protein targeting to membrane network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000000266	Uncharacterized protein. (157 aa)
	dad1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...] (115 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (94 aa)
	LOC109996604	Oxidative stress responsive kinase 1a. (524 aa)
	stk39	Serine threonine kinase 39. (505 aa)
	ENSLBEP00000008484	SEC61 translocon gamma subunit. (157 aa)
	ost4	Oligosaccharyltransferase complex subunit 4 (non-catalytic). (37 aa)
	mlec	Malectin. (283 aa)
	sec63	SEC63 homolog, protein translocation regulator. (754 aa)
	rpn2	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (645 aa)
	ssr3	Signal sequence receptor, gamma. (185 aa)
	stt3a	STT3 oligosaccharyltransferase complex catalytic subunit A. (670 aa)
	tusc3	Tumor suppressor candidate 3. (315 aa)
	sec62	SEC62 homolog, preprotein translocation factor. (438 aa)
	ssr2	Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. (184 aa)
	tmem258	Transmembrane protein 258. (79 aa)
	ssr1	Signal sequence receptor, alpha. (298 aa)
	ssr4	Signal sequence receptor, delta. (168 aa)
	LOC109983902	Plug_translocon domain-containing protein. (476 aa)
	ENSLBEP00000020930	Uncharacterized protein. (78 aa)
	ddost	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...] (444 aa)
	ostc	Oligosaccharyltransferase complex subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All s [...] (149 aa)
	mogs	Mannosyl-oligosaccharide glucosidase. (829 aa)
	LOC109990315	Uncharacterized protein. (287 aa)
	magt1	Magnesium transporter 1. (328 aa)
	LOC110000818	STT3 oligosaccharyltransferase complex catalytic subunit B. (831 aa)
	rpn1	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (604 aa)
	ENSLBEP00000036717	Uncharacterized protein. (92 aa)
	LOC109988675	STT3 oligosaccharyltransferase complex catalytic subunit B. (676 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000000266	ENSLBEP00000008484	ENSLBEP00000000266	ENSLBEP00000008484	Uncharacterized protein.	SEC61 translocon gamma subunit.	0.884
ENSLBEP00000000266	ENSLBEP00000020930	ENSLBEP00000000266	ENSLBEP00000020930	Uncharacterized protein.	Uncharacterized protein.	0.637
ENSLBEP00000000266	ENSLBEP00000036717	ENSLBEP00000000266	ENSLBEP00000036717	Uncharacterized protein.	Uncharacterized protein.	0.637
ENSLBEP00000000266	LOC109983902	ENSLBEP00000000266	ENSLBEP00000020572	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.926
ENSLBEP00000000266	LOC109988675	ENSLBEP00000000266	ENSLBEP00000036745	Uncharacterized protein.	STT3 oligosaccharyltransferase complex catalytic subunit B.	0.637
ENSLBEP00000000266	LOC109990315	ENSLBEP00000000266	ENSLBEP00000029305	Uncharacterized protein.	Uncharacterized protein.	0.983
ENSLBEP00000000266	LOC110000818	ENSLBEP00000000266	ENSLBEP00000032163	Uncharacterized protein.	STT3 oligosaccharyltransferase complex catalytic subunit B.	0.637
ENSLBEP00000000266	dad1	ENSLBEP00000000266	ENSLBEP00000001717	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	0.897
ENSLBEP00000000266	ddost	ENSLBEP00000000266	ENSLBEP00000024599	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	0.931
ENSLBEP00000000266	magt1	ENSLBEP00000000266	ENSLBEP00000031253	Uncharacterized protein.	Magnesium transporter 1.	0.508
ENSLBEP00000000266	ost4	ENSLBEP00000000266	ENSLBEP00000008814	Uncharacterized protein.	Oligosaccharyltransferase complex subunit 4 (non-catalytic).	0.751
ENSLBEP00000000266	ostc	ENSLBEP00000000266	ENSLBEP00000026190	Uncharacterized protein.	Oligosaccharyltransferase complex subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All s [...]	0.879
ENSLBEP00000000266	rpn1	ENSLBEP00000000266	ENSLBEP00000035312	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.858
ENSLBEP00000000266	rpn2	ENSLBEP00000000266	ENSLBEP00000012727	Uncharacterized protein.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]	0.836
ENSLBEP00000000266	sec61b	ENSLBEP00000000266	ENSLBEP00000003078	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.988
ENSLBEP00000000266	sec63	ENSLBEP00000000266	ENSLBEP00000012040	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.566
ENSLBEP00000000266	ssr1	ENSLBEP00000000266	ENSLBEP00000019336	Uncharacterized protein.	Signal sequence receptor, alpha.	0.988
ENSLBEP00000000266	ssr3	ENSLBEP00000000266	ENSLBEP00000014783	Uncharacterized protein.	Signal sequence receptor, gamma.	0.998
ENSLBEP00000000266	ssr4	ENSLBEP00000000266	ENSLBEP00000019348	Uncharacterized protein.	Signal sequence receptor, delta.	0.998
ENSLBEP00000000266	stt3a	ENSLBEP00000000266	ENSLBEP00000016570	Uncharacterized protein.	STT3 oligosaccharyltransferase complex catalytic subunit A.	0.813