27 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lrrc56	Leucine rich repeat containing 56. (635 aa)
	LOC109993470	Serine/threonine-protein phosphatase. (338 aa)
	LOC109992897	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (342 aa)
	ENSLBEP00000006218	Uncharacterized protein. (437 aa)
	LOC109984913	Uncharacterized protein. (193 aa)
	LOC109985798	PRKG1_interact domain-containing protein. (332 aa)
	ppp1r11	Protein phosphatase 1, regulatory (inhibitor) subunit 11. (123 aa)
	PPP1CB	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
	ppp1r12c	Protein phosphatase 1, regulatory subunit 12C. (634 aa)
	ppp1r27	Protein phosphatase 1, regulatory subunit 27b. (167 aa)
	LOC109993729	Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (359 aa)
	ppp1r16a	Protein phosphatase 1, regulatory subunit 16A. (576 aa)
	ENSLBEP00000023782	Uncharacterized protein. (504 aa)
	ppp1r7	Protein phosphatase 1, regulatory (inhibitor) subunit 7. (345 aa)
	LOC110003138	ANK_REP_REGION domain-containing protein. (746 aa)
	LOC109989670	Rho-associated, coiled-coil containing protein kinase 2b; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1486 aa)
	pkn3	Protein kinase N3. (864 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1367 aa)
	LOC109990297	Uncharacterized protein. (193 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1378 aa)
	ppp1r12a	Protein phosphatase 1 regulatory subunit. (990 aa)
	LOC109982329	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1635 aa)
	LOC109993874	ANK_REP_REGION domain-containing protein. (234 aa)
	LOC109981752	PRKG1_interact domain-containing protein. (182 aa)
	ppp1r2	Protein phosphatase 1, regulatory (inhibitor) subunit 2. (209 aa)
	LOC109980786	Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa. (169 aa)
	LOC109987581	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000006218	LOC109981752	ENSLBEP00000006218	ENSLBEP00000032324	Uncharacterized protein.	PRKG1_interact domain-containing protein.	0.630
ENSLBEP00000006218	LOC109984913	ENSLBEP00000006218	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.747
ENSLBEP00000006218	LOC109985798	ENSLBEP00000006218	ENSLBEP00000011042	Uncharacterized protein.	PRKG1_interact domain-containing protein.	0.630
ENSLBEP00000006218	LOC109987581	ENSLBEP00000006218	ENSLBEP00000038364	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.581
ENSLBEP00000006218	LOC109990297	ENSLBEP00000006218	ENSLBEP00000027144	Uncharacterized protein.	Uncharacterized protein.	0.747
ENSLBEP00000006218	LOC109992897	ENSLBEP00000006218	ENSLBEP00000004922	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.581
ENSLBEP00000006218	LOC109993470	ENSLBEP00000006218	ENSLBEP00000003336	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.584
ENSLBEP00000006218	LOC109993874	ENSLBEP00000006218	ENSLBEP00000030558	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.567
ENSLBEP00000006218	LOC110003138	ENSLBEP00000006218	ENSLBEP00000025115	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.630
ENSLBEP00000006218	PPP1CB	ENSLBEP00000006218	ENSLBEP00000015864	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.581
ENSLBEP00000006218	lrrc56	ENSLBEP00000006218	ENSLBEP00000002375	Uncharacterized protein.	Leucine rich repeat containing 56.	0.406
ENSLBEP00000006218	pkn3	ENSLBEP00000006218	ENSLBEP00000026189	Uncharacterized protein.	Protein kinase N3.	0.409
ENSLBEP00000006218	ppp1r12a	ENSLBEP00000006218	ENSLBEP00000029033	Uncharacterized protein.	Protein phosphatase 1 regulatory subunit.	0.630
ENSLBEP00000006218	ppp1r12c	ENSLBEP00000006218	ENSLBEP00000016698	Uncharacterized protein.	Protein phosphatase 1, regulatory subunit 12C.	0.630
ENSLBEP00000006218	ppp1r16a	ENSLBEP00000006218	ENSLBEP00000021756	Uncharacterized protein.	Protein phosphatase 1, regulatory subunit 16A.	0.567
ENSLBEP00000006218	ppp1r27	ENSLBEP00000006218	ENSLBEP00000016864	Uncharacterized protein.	Protein phosphatase 1, regulatory subunit 27b.	0.567
ENSLBEP00000023782	LOC109981752	ENSLBEP00000023782	ENSLBEP00000032324	Uncharacterized protein.	PRKG1_interact domain-containing protein.	0.630
ENSLBEP00000023782	LOC109984913	ENSLBEP00000023782	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.747
ENSLBEP00000023782	LOC109985798	ENSLBEP00000023782	ENSLBEP00000011042	Uncharacterized protein.	PRKG1_interact domain-containing protein.	0.630
ENSLBEP00000023782	LOC109987581	ENSLBEP00000023782	ENSLBEP00000038364	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.581