(23 nodes) Transcription coactivator binding network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109981070	Uncharacterized protein. (662 aa)
	LOC109991330	Uncharacterized protein. (1016 aa)
	LOC109983884	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1866 aa)
	ENSLBEP00000022272	TAZ-type domain-containing protein. (362 aa)
	GATA2	GATA binding protein 2. (451 aa)
	LOC109983926	GATA binding protein 1a. (421 aa)
	LOC109981172	Mothers against decapentaplegic homolog. (503 aa)
	zbtb49	Zinc finger and BTB domain containing 49. (791 aa)
	LOC110004120	E1A binding protein p300 b. (2680 aa)
	LOC109994130	CREB binding protein b. (2331 aa)
	LOC109983387	GATA binding protein 2a. (457 aa)
	vgll4	Vestigial-like family member 4b. (320 aa)
	LOC109998931	Mothers against decapentaplegic homolog. (563 aa)
	LOC109983351	Vestigial like 4 like. (267 aa)
	LOC109985914	Citron rho-interacting serine/threonine kinase b. (1595 aa)
	ep300	E1A binding protein p300 a. (2577 aa)
	LOC109992957	Mediator complex subunit 25. (688 aa)
	ENSLBEP00000005272	Uncharacterized protein. (339 aa)
	LOC109981436	Uncharacterized protein. (790 aa)
	LOC109981008	Vestigial-like family member 4a. (262 aa)
	LOC109991202	Mothers against decapentaplegic homolog. (521 aa)
	LOC109989542	CREB binding protein a. (2347 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (510 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000005272	ENSLBEP00000022272	ENSLBEP00000005272	ENSLBEP00000022272	Uncharacterized protein.	TAZ-type domain-containing protein.	0.712
ENSLBEP00000005272	LOC109981070	ENSLBEP00000005272	ENSLBEP00000018998	Uncharacterized protein.	Uncharacterized protein.	0.852
ENSLBEP00000005272	LOC109989542	ENSLBEP00000005272	ENSLBEP00000018666	Uncharacterized protein.	CREB binding protein a.	0.742
ENSLBEP00000005272	LOC109994130	ENSLBEP00000005272	ENSLBEP00000035655	Uncharacterized protein.	CREB binding protein b.	0.742
ENSLBEP00000005272	LOC110004120	ENSLBEP00000005272	ENSLBEP00000035749	Uncharacterized protein.	E1A binding protein p300 b.	0.712
ENSLBEP00000005272	ep300	ENSLBEP00000005272	ENSLBEP00000003268	Uncharacterized protein.	E1A binding protein p300 a.	0.712
ENSLBEP00000022272	ENSLBEP00000005272	ENSLBEP00000022272	ENSLBEP00000005272	TAZ-type domain-containing protein.	Uncharacterized protein.	0.712
ENSLBEP00000022272	GATA2	ENSLBEP00000022272	ENSLBEP00000023306	TAZ-type domain-containing protein.	GATA binding protein 2.	0.744
ENSLBEP00000022272	LOC109981070	ENSLBEP00000022272	ENSLBEP00000018998	TAZ-type domain-containing protein.	Uncharacterized protein.	0.712
ENSLBEP00000022272	LOC109981172	ENSLBEP00000022272	ENSLBEP00000023864	TAZ-type domain-containing protein.	Mothers against decapentaplegic homolog.	0.750
ENSLBEP00000022272	LOC109981436	ENSLBEP00000022272	ENSLBEP00000007964	TAZ-type domain-containing protein.	Uncharacterized protein.	0.712
ENSLBEP00000022272	LOC109983387	ENSLBEP00000022272	ENSLBEP00000035267	TAZ-type domain-containing protein.	GATA binding protein 2a.	0.744
ENSLBEP00000022272	LOC109983926	ENSLBEP00000022272	ENSLBEP00000023574	TAZ-type domain-containing protein.	GATA binding protein 1a.	0.799
ENSLBEP00000022272	LOC109989542	ENSLBEP00000022272	ENSLBEP00000018666	TAZ-type domain-containing protein.	CREB binding protein a.	0.986
ENSLBEP00000022272	LOC109991202	ENSLBEP00000022272	ENSLBEP00000009797	TAZ-type domain-containing protein.	Mothers against decapentaplegic homolog.	0.750
ENSLBEP00000022272	LOC109992957	ENSLBEP00000022272	ENSLBEP00000004400	TAZ-type domain-containing protein.	Mediator complex subunit 25.	0.424
ENSLBEP00000022272	LOC109994130	ENSLBEP00000022272	ENSLBEP00000035655	TAZ-type domain-containing protein.	CREB binding protein b.	0.986
ENSLBEP00000022272	LOC109998931	ENSLBEP00000022272	ENSLBEP00000032363	TAZ-type domain-containing protein.	Mothers against decapentaplegic homolog.	0.751
ENSLBEP00000022272	ppard	ENSLBEP00000022272	ENSLBEP00000019330	TAZ-type domain-containing protein.	Peroxisome proliferator-activated receptor delta b.	0.416
GATA2	ENSLBEP00000022272	ENSLBEP00000023306	ENSLBEP00000022272	GATA binding protein 2.	TAZ-type domain-containing protein.	0.744