(6 nodes) Fatty acid alpha-oxidation network (Labrus bergylta)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109995371	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (625 aa)
	hacl1	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (568 aa)
	LOC110004402	Peroxisomal biogenesis factor 13. (370 aa)
	phyh	Phytanoyl-CoA 2-hydroxylase. (333 aa)
	LOC110005360	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (610 aa)
	LOC109976526	Peroxin-13_N domain-containing protein. (530 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109976526	LOC109995371	ENSLBEP00000026377	ENSLBEP00000012351	Peroxin-13_N domain-containing protein.	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	0.711
LOC109976526	LOC110005360	ENSLBEP00000026377	ENSLBEP00000029467	Peroxin-13_N domain-containing protein.	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	0.711
LOC109976526	hacl1	ENSLBEP00000026377	ENSLBEP00000011224	Peroxin-13_N domain-containing protein.	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	0.713
LOC109976526	phyh	ENSLBEP00000026377	ENSLBEP00000036723	Peroxin-13_N domain-containing protein.	Phytanoyl-CoA 2-hydroxylase.	0.735
LOC109995371	LOC109976526	ENSLBEP00000012351	ENSLBEP00000026377	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	Peroxin-13_N domain-containing protein.	0.711
LOC109995371	LOC110004402	ENSLBEP00000012351	ENSLBEP00000008515	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	Peroxisomal biogenesis factor 13.	0.711
LOC110004402	LOC109995371	ENSLBEP00000008515	ENSLBEP00000012351	Peroxisomal biogenesis factor 13.	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	0.711
LOC110004402	LOC110005360	ENSLBEP00000008515	ENSLBEP00000029467	Peroxisomal biogenesis factor 13.	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	0.711
LOC110004402	hacl1	ENSLBEP00000008515	ENSLBEP00000011224	Peroxisomal biogenesis factor 13.	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	0.713
LOC110004402	phyh	ENSLBEP00000008515	ENSLBEP00000036723	Peroxisomal biogenesis factor 13.	Phytanoyl-CoA 2-hydroxylase.	0.735
LOC110005360	LOC109976526	ENSLBEP00000029467	ENSLBEP00000026377	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	Peroxin-13_N domain-containing protein.	0.711
LOC110005360	LOC110004402	ENSLBEP00000029467	ENSLBEP00000008515	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family.	Peroxisomal biogenesis factor 13.	0.711
hacl1	LOC109976526	ENSLBEP00000011224	ENSLBEP00000026377	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	Peroxin-13_N domain-containing protein.	0.713
hacl1	LOC110004402	ENSLBEP00000011224	ENSLBEP00000008515	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	Peroxisomal biogenesis factor 13.	0.713
hacl1	phyh	ENSLBEP00000011224	ENSLBEP00000036723	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	Phytanoyl-CoA 2-hydroxylase.	0.402
phyh	LOC109976526	ENSLBEP00000036723	ENSLBEP00000026377	Phytanoyl-CoA 2-hydroxylase.	Peroxin-13_N domain-containing protein.	0.735
phyh	LOC110004402	ENSLBEP00000036723	ENSLBEP00000008515	Phytanoyl-CoA 2-hydroxylase.	Peroxisomal biogenesis factor 13.	0.735
phyh	hacl1	ENSLBEP00000036723	ENSLBEP00000011224	Phytanoyl-CoA 2-hydroxylase.	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.	0.402