(27 nodes) Regulation of dopamine secretion network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110001653	Synaptotagmin IXa. (563 aa)
	LOC109975404	C2 domain-containing protein. (309 aa)
	LOC109983014	Synaptotagmin VIIb. (568 aa)
	LOC109976684	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (385 aa)
	LOC109976661	Gamma-synuclein; Belongs to the synuclein family. (123 aa)
	LOC110003634	C2 domain-containing protein. (381 aa)
	LOC109992751	Synaptotagmin IXb. (495 aa)
	LOC109981839	Synaptotagmin XV. (392 aa)
	LOC109993317	Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family. (113 aa)
	LOC109988704	Synaptotagmin Vb. (423 aa)
	SYT2	Synaptotagmin 2. (433 aa)
	LOC110003967	Uncharacterized protein. (147 aa)
	syt1	Synaptotagmin Ia. (417 aa)
	LOC109994400	Synaptotagmin-10-like. (538 aa)
	syt12	Synaptotagmin XII. (429 aa)
	LOC109990773	Uncharacterized protein; Belongs to the synuclein family. (123 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (454 aa)
	pink1	PTEN induced kinase 1. (575 aa)
	syt4	Synaptotagmin IV. (476 aa)
	ENSLBEP00000015692	Synaptotagmin Ib. (365 aa)
	LOC109996997	Synaptotagmin VIa. (541 aa)
	syt11	C2 domain-containing protein. (124 aa)
	LOC110004917	Synaptotagmin VIIb. (345 aa)
	LOC109985771	Synaptotagmin IIa. (433 aa)
	syt10	Synaptotagmin X. (538 aa)
	LOC109975548	C2 domain-containing protein. (381 aa)
	syt3	Synaptotagmin III. (558 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000015692	LOC109975404	ENSLBEP00000015692	ENSLBEP00000001543	Synaptotagmin Ib.	C2 domain-containing protein.	0.540
ENSLBEP00000015692	LOC109975548	ENSLBEP00000015692	ENSLBEP00000005690	Synaptotagmin Ib.	C2 domain-containing protein.	0.715
ENSLBEP00000015692	LOC109992751	ENSLBEP00000015692	ENSLBEP00000038607	Synaptotagmin Ib.	Synaptotagmin IXb.	0.552
ENSLBEP00000015692	LOC110001653	ENSLBEP00000015692	ENSLBEP00000003270	Synaptotagmin Ib.	Synaptotagmin IXa.	0.550
ENSLBEP00000015692	LOC110003634	ENSLBEP00000015692	ENSLBEP00000007898	Synaptotagmin Ib.	C2 domain-containing protein.	0.715
ENSLBEP00000015692	syt11	ENSLBEP00000015692	ENSLBEP00000013681	Synaptotagmin Ib.	C2 domain-containing protein.	0.715
ENSLBEP00000015692	syt4	ENSLBEP00000015692	ENSLBEP00000022848	Synaptotagmin Ib.	Synaptotagmin IV.	0.715
LOC109975404	ENSLBEP00000015692	ENSLBEP00000001543	ENSLBEP00000015692	C2 domain-containing protein.	Synaptotagmin Ib.	0.540
LOC109975404	LOC109975548	ENSLBEP00000001543	ENSLBEP00000005690	C2 domain-containing protein.	C2 domain-containing protein.	0.553
LOC109975404	LOC109985771	ENSLBEP00000001543	ENSLBEP00000010923	C2 domain-containing protein.	Synaptotagmin IIa.	0.573
LOC109975404	LOC109988704	ENSLBEP00000001543	ENSLBEP00000033545	C2 domain-containing protein.	Synaptotagmin Vb.	0.577
LOC109975404	LOC110003634	ENSLBEP00000001543	ENSLBEP00000007898	C2 domain-containing protein.	C2 domain-containing protein.	0.553
LOC109975404	SYT2	ENSLBEP00000001543	ENSLBEP00000032346	C2 domain-containing protein.	Synaptotagmin 2.	0.573
LOC109975404	syt1	ENSLBEP00000001543	ENSLBEP00000028902	C2 domain-containing protein.	Synaptotagmin Ia.	0.576
LOC109975404	syt11	ENSLBEP00000001543	ENSLBEP00000013681	C2 domain-containing protein.	C2 domain-containing protein.	0.553
LOC109975404	syt4	ENSLBEP00000001543	ENSLBEP00000022848	C2 domain-containing protein.	Synaptotagmin IV.	0.553
LOC109975548	ENSLBEP00000015692	ENSLBEP00000005690	ENSLBEP00000015692	C2 domain-containing protein.	Synaptotagmin Ib.	0.715
LOC109975548	LOC109975404	ENSLBEP00000005690	ENSLBEP00000001543	C2 domain-containing protein.	C2 domain-containing protein.	0.553
LOC109975548	LOC109985771	ENSLBEP00000005690	ENSLBEP00000010923	C2 domain-containing protein.	Synaptotagmin IIa.	0.715
LOC109975548	LOC109988704	ENSLBEP00000005690	ENSLBEP00000033545	C2 domain-containing protein.	Synaptotagmin Vb.	0.715