(5 nodes) Protein import into peroxisome matrix, docking network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110004402	Peroxisomal biogenesis factor 13. (370 aa)
	pex5	Peroxisomal biogenesis factor 5. (614 aa)
	LOC109976526	Peroxin-13_N domain-containing protein. (530 aa)
	pex14	Peroxisomal biogenesis factor 14. (358 aa)
	LOC109995051	Peroxisomal biogenesis factor 5-like a. (603 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109976526	LOC109995051	ENSLBEP00000026377	ENSLBEP00000036611	Peroxin-13_N domain-containing protein.	Peroxisomal biogenesis factor 5-like a.	0.974
LOC109976526	pex14	ENSLBEP00000026377	ENSLBEP00000029114	Peroxin-13_N domain-containing protein.	Peroxisomal biogenesis factor 14.	0.993
LOC109976526	pex5	ENSLBEP00000026377	ENSLBEP00000015273	Peroxin-13_N domain-containing protein.	Peroxisomal biogenesis factor 5.	0.975
LOC109995051	LOC109976526	ENSLBEP00000036611	ENSLBEP00000026377	Peroxisomal biogenesis factor 5-like a.	Peroxin-13_N domain-containing protein.	0.974
LOC109995051	LOC110004402	ENSLBEP00000036611	ENSLBEP00000008515	Peroxisomal biogenesis factor 5-like a.	Peroxisomal biogenesis factor 13.	0.974
LOC109995051	pex14	ENSLBEP00000036611	ENSLBEP00000029114	Peroxisomal biogenesis factor 5-like a.	Peroxisomal biogenesis factor 14.	0.993
LOC109995051	pex5	ENSLBEP00000036611	ENSLBEP00000015273	Peroxisomal biogenesis factor 5-like a.	Peroxisomal biogenesis factor 5.	0.849
LOC110004402	LOC109995051	ENSLBEP00000008515	ENSLBEP00000036611	Peroxisomal biogenesis factor 13.	Peroxisomal biogenesis factor 5-like a.	0.974
LOC110004402	pex14	ENSLBEP00000008515	ENSLBEP00000029114	Peroxisomal biogenesis factor 13.	Peroxisomal biogenesis factor 14.	0.993
LOC110004402	pex5	ENSLBEP00000008515	ENSLBEP00000015273	Peroxisomal biogenesis factor 13.	Peroxisomal biogenesis factor 5.	0.975
pex14	LOC109976526	ENSLBEP00000029114	ENSLBEP00000026377	Peroxisomal biogenesis factor 14.	Peroxin-13_N domain-containing protein.	0.993
pex14	LOC109995051	ENSLBEP00000029114	ENSLBEP00000036611	Peroxisomal biogenesis factor 14.	Peroxisomal biogenesis factor 5-like a.	0.993
pex14	LOC110004402	ENSLBEP00000029114	ENSLBEP00000008515	Peroxisomal biogenesis factor 14.	Peroxisomal biogenesis factor 13.	0.993
pex14	pex5	ENSLBEP00000029114	ENSLBEP00000015273	Peroxisomal biogenesis factor 14.	Peroxisomal biogenesis factor 5.	0.993
pex5	LOC109976526	ENSLBEP00000015273	ENSLBEP00000026377	Peroxisomal biogenesis factor 5.	Peroxin-13_N domain-containing protein.	0.975
pex5	LOC109995051	ENSLBEP00000015273	ENSLBEP00000036611	Peroxisomal biogenesis factor 5.	Peroxisomal biogenesis factor 5-like a.	0.849
pex5	LOC110004402	ENSLBEP00000015273	ENSLBEP00000008515	Peroxisomal biogenesis factor 5.	Peroxisomal biogenesis factor 13.	0.975
pex5	pex14	ENSLBEP00000015273	ENSLBEP00000029114	Peroxisomal biogenesis factor 5.	Peroxisomal biogenesis factor 14.	0.993