25 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109981744	Plakophilin 1b. (802 aa)
	LOC109995768	Uncharacterized protein. (748 aa)
	vcl	Vinculin. (1066 aa)
	ENSLBEP00000010466	Uncharacterized protein. (61 aa)
	LOC109990637	Junction plakoglobin a. (705 aa)
	ENSLBEP00000011729	Plakophilin 1a. (365 aa)
	pof1b	POF1B actin binding protein. (452 aa)
	LOC109989628	Uncharacterized protein. (768 aa)
	LOC110002537	Vinculin a. (596 aa)
	PKP3	Plakophilin 3a. (795 aa)
	LOC109985264	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (949 aa)
	LOC109985104	Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (894 aa)
	KAZN	Kazrin, periplakin interacting protein a. (856 aa)
	ENSLBEP00000029629	Pinin_SDK_memA domain-containing protein. (551 aa)
	ENSLBEP00000029670	Pinin_SDK_N domain-containing protein. (124 aa)
	jam3	Junctional adhesion molecule 3a. (302 aa)
	klhl24	Kelch-like family member 24a. (600 aa)
	klhl6	Kelch-like family member 6. (607 aa)
	LOC109980584	Kazrin, periplakin interacting protein b. (970 aa)
	LOC109985813	Si:ch211-256e16.3. (621 aa)
	LOC109993401	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1047 aa)
	LOC109993407	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (1171 aa)
	LOC109993402	Si:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. (870 aa)
	LOC109980789	Junctional adhesion molecule 3b. (303 aa)
	pkp2	Plakophilin 2. (779 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000010466	ENSLBEP00000011729	ENSLBEP00000010466	ENSLBEP00000011729	Uncharacterized protein.	Plakophilin 1a.	0.580
ENSLBEP00000010466	LOC109981744	ENSLBEP00000010466	ENSLBEP00000032985	Uncharacterized protein.	Plakophilin 1b.	0.580
ENSLBEP00000010466	LOC109985104	ENSLBEP00000010466	ENSLBEP00000023733	Uncharacterized protein.	Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.414
ENSLBEP00000010466	LOC109985264	ENSLBEP00000010466	ENSLBEP00000023571	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.413
ENSLBEP00000010466	LOC109989628	ENSLBEP00000010466	ENSLBEP00000022813	Uncharacterized protein.	Uncharacterized protein.	0.580
ENSLBEP00000010466	LOC109990637	ENSLBEP00000010466	ENSLBEP00000011430	Uncharacterized protein.	Junction plakoglobin a.	0.826
ENSLBEP00000010466	LOC109993401	ENSLBEP00000010466	ENSLBEP00000037787	Uncharacterized protein.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.413
ENSLBEP00000010466	LOC109993402	ENSLBEP00000010466	ENSLBEP00000037847	Uncharacterized protein.	Si:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.413
ENSLBEP00000010466	LOC109993407	ENSLBEP00000010466	ENSLBEP00000037795	Uncharacterized protein.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.413
ENSLBEP00000010466	LOC109995768	ENSLBEP00000010466	ENSLBEP00000004708	Uncharacterized protein.	Uncharacterized protein.	0.826
ENSLBEP00000010466	PKP3	ENSLBEP00000010466	ENSLBEP00000023269	Uncharacterized protein.	Plakophilin 3a.	0.580
ENSLBEP00000010466	pkp2	ENSLBEP00000010466	ENSLBEP00000038403	Uncharacterized protein.	Plakophilin 2.	0.580
ENSLBEP00000010466	vcl	ENSLBEP00000010466	ENSLBEP00000005597	Uncharacterized protein.	Vinculin.	0.719
ENSLBEP00000011729	ENSLBEP00000010466	ENSLBEP00000011729	ENSLBEP00000010466	Plakophilin 1a.	Uncharacterized protein.	0.580
ENSLBEP00000011729	LOC109985104	ENSLBEP00000011729	ENSLBEP00000023733	Plakophilin 1a.	Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.830
ENSLBEP00000011729	LOC109985264	ENSLBEP00000011729	ENSLBEP00000023571	Plakophilin 1a.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.726
ENSLBEP00000011729	LOC109990637	ENSLBEP00000011729	ENSLBEP00000011430	Plakophilin 1a.	Junction plakoglobin a.	0.735
ENSLBEP00000011729	LOC109993401	ENSLBEP00000011729	ENSLBEP00000037787	Plakophilin 1a.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.726
ENSLBEP00000011729	LOC109993402	ENSLBEP00000011729	ENSLBEP00000037847	Plakophilin 1a.	Si:ch73-74h11.1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.726
ENSLBEP00000011729	LOC109993407	ENSLBEP00000011729	ENSLBEP00000037795	Plakophilin 1a.	Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.	0.726