(46 nodes) Leukocyte chemotaxis network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109995876	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (418 aa)
	LOC109999265	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (358 aa)
	LOC109975478	Cytochrome P450, family 7, subfamily B, polypeptide 1. (537 aa)
	gbf1	Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1805 aa)
	LOC109987072	Endothelin 2. (219 aa)
	ENSLBEP00000002730	C-C motif chemokine. (115 aa)
	ano6	Anoctamin. (920 aa)
	LOC109990683	Solute carrier family 37 member 4a. (429 aa)
	LOC109990682	Solute carrier family 37 member 4. (437 aa)
	trim33	Tripartite motif containing 33. (866 aa)
	LOC109981026	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (412 aa)
	bsg	Basigin. (273 aa)
	LOC109976314	C-C motif chemokine. (103 aa)
	LOC109989114	SCY domain-containing protein. (112 aa)
	scg2	Uncharacterized protein. (608 aa)
	cxcr5	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. (372 aa)
	il16	Interleukin 16. (1558 aa)
	LOC109998827	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	LOC110003091	Galectin. (296 aa)
	ppib	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
	LOC109984338	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (448 aa)
	LOC110004759	Signal recognition particle 54 kDa protein. (504 aa)
	LOC109986980	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (268 aa)
	LOC110001247	Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family. (365 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (1917 aa)
	LOC109983961	Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family. (342 aa)
	LOC109983967	G protein-coupled receptor 183a; Belongs to the G-protein coupled receptor 1 family. (384 aa)
	LOC109984085	Secretogranin II (chromogranin C), b. (578 aa)
	il17ra	SEFIR domain-containing protein. (807 aa)
	ENSLBEP00000033705	Galectin. (281 aa)
	ENSLBEP00000034416	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family. (347 aa)
	LOC109983424	TAFA chemokine like family member 4b. (135 aa)
	ENSLBEP00000016916	Galectin. (136 aa)
	LOC109982149	Solute carrier family 37 member 4b. (450 aa)
	gas6	Growth arrest-specific 6. (627 aa)
	CKLF	Chemokine like factor. (150 aa)
	LOC109992014	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (556 aa)
	LOC109996964	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (513 aa)
	LOC109984927	TAFA chemokine like family member 3. (169 aa)
	LOC110003788	SEFIR domain-containing protein. (617 aa)
	LOC109983694	G_PROTEIN_RECEP_F1_2 domain-containing protein. (335 aa)
	ENSLBEP00000009539	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (350 aa)
	LOC109987769	Chemokine (C-C motif) ligand 25b. (100 aa)
	ccl17	SCY domain-containing protein. (98 aa)
	ENSLBEP00000007935	Ninjurin 1. (130 aa)
	LOC109980908	Uncharacterized protein. (597 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000002730	ENSLBEP00000009539	ENSLBEP00000002730	ENSLBEP00000009539	C-C motif chemokine.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.832
ENSLBEP00000002730	ENSLBEP00000034416	ENSLBEP00000002730	ENSLBEP00000034416	C-C motif chemokine.	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.832
ENSLBEP00000002730	LOC109976314	ENSLBEP00000002730	ENSLBEP00000021617	C-C motif chemokine.	C-C motif chemokine.	0.504
ENSLBEP00000002730	LOC109987769	ENSLBEP00000002730	ENSLBEP00000008897	C-C motif chemokine.	Chemokine (C-C motif) ligand 25b.	0.504
ENSLBEP00000002730	LOC109989114	ENSLBEP00000002730	ENSLBEP00000021973	C-C motif chemokine.	SCY domain-containing protein.	0.424
ENSLBEP00000002730	LOC109999265	ENSLBEP00000002730	ENSLBEP00000005201	C-C motif chemokine.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.832
ENSLBEP00000002730	cxcr5	ENSLBEP00000002730	ENSLBEP00000023330	C-C motif chemokine.	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.	0.896
ENSLBEP00000009539	ENSLBEP00000002730	ENSLBEP00000009539	ENSLBEP00000002730	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.832
ENSLBEP00000009539	ENSLBEP00000034416	ENSLBEP00000009539	ENSLBEP00000034416	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	0.855
ENSLBEP00000009539	LOC109976314	ENSLBEP00000009539	ENSLBEP00000021617	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.739
ENSLBEP00000009539	LOC109987769	ENSLBEP00000009539	ENSLBEP00000008897	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) ligand 25b.	0.739
ENSLBEP00000009539	LOC109989114	ENSLBEP00000009539	ENSLBEP00000021973	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.872
ENSLBEP00000009539	LOC109999265	ENSLBEP00000009539	ENSLBEP00000005201	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.843
ENSLBEP00000009539	ccl17	ENSLBEP00000009539	ENSLBEP00000008696	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.837
ENSLBEP00000009539	cxcr5	ENSLBEP00000009539	ENSLBEP00000023330	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.	0.711
ENSLBEP00000034416	ENSLBEP00000002730	ENSLBEP00000034416	ENSLBEP00000002730	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.832
ENSLBEP00000034416	ENSLBEP00000009539	ENSLBEP00000034416	ENSLBEP00000009539	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.855
ENSLBEP00000034416	LOC109976314	ENSLBEP00000034416	ENSLBEP00000021617	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.739
ENSLBEP00000034416	LOC109987769	ENSLBEP00000034416	ENSLBEP00000008897	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) ligand 25b.	0.739
ENSLBEP00000034416	LOC109989114	ENSLBEP00000034416	ENSLBEP00000021973	Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.872