69 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109990297	Uncharacterized protein. (193 aa)
	ENSLBEP00000000688	BTB domain-containing protein. (202 aa)
	ENSLBEP00000000694	Si:dkey-6b12.5. (242 aa)
	LOC109994558	Uncharacterized protein. (539 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LOC109983547	Ras homolog family member Gb. (191 aa)
	LOC109980884	Ras homolog family member Ca. (196 aa)
	ENSLBEP00000003355	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (121 aa)
	nckap1	NCK-associated protein 1. (1169 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (891 aa)
	rnd3	Rho family GTPase 3a. (243 aa)
	ENSLBEP00000006132	GBD/FH3 domain-containing protein. (148 aa)
	rhobtb2	Rho related BTB domain containing 2a. (721 aa)
	LOC109996877	Rho family GTPase 2. (231 aa)
	LOC109983070	Rho family GTPase 2. (234 aa)
	ENSLBEP00000008321	FERM domain-containing protein. (1167 aa)
	LOC110001707	Rho related BTB domain containing 4. (709 aa)
	LOC109998040	PH domain-containing protein. (1298 aa)
	ENSLBEP00000009945	Formin homology 2 domain containing 3b. (683 aa)
	ENSLBEP00000009979	Uncharacterized protein. (132 aa)
	ENSLBEP00000009995	Formin_GBD_N domain-containing protein. (72 aa)
	LOC109984913	Uncharacterized protein. (193 aa)
	LOC109993560	Uncharacterized protein. (202 aa)
	LOC109996947	Rac family small GTPase 3b. (192 aa)
	ENSLBEP00000011739	Uncharacterized protein. (451 aa)
	RAC1	Rac family small GTPase 1. (192 aa)
	LOC109984918	Uncharacterized protein. (205 aa)
	epb41l2	FERM domain-containing protein. (1067 aa)
	LOC109983148	FERM domain-containing protein. (1339 aa)
	ENSLBEP00000013844	Uncharacterized protein. (660 aa)
	LOC110000554	Si:ch1073-416j23.1. (624 aa)
	LOC110006228	FERM domain-containing protein. (950 aa)
	fmnl3	Formin-like 3. (1019 aa)
	LOC109991165	Uncharacterized protein. (215 aa)
	LLGL1	LLGL scribble cell polarity complex component 1. (1046 aa)
	strip1	Striatin interacting protein 1. (815 aa)
	LOC109994817	Rho family GTPase 1b. (232 aa)
	ENSLBEP00000017996	Uncharacterized protein. (459 aa)
	epb41l3	Erythrocyte membrane protein band 4.1-like 3b. (1220 aa)
	LOC109999457	Formin homology 2 domain containing 1. (1346 aa)
	nckap1l	Uncharacterized protein. (1123 aa)
	LOC109981514	Uncharacterized protein. (193 aa)
	LOC110002500	Uncharacterized protein. (911 aa)
	racgap1	Rac GTPase activating protein 1. (631 aa)
	LOC109991455	Angiomotin like 2b. (704 aa)
	RND1	Rho family GTPase 1. (232 aa)
	LOC109981150	Ras homolog family member F. (207 aa)
	RHOB	Ras homolog family member B. (141 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1367 aa)
	fmnl2	Formin-like 2a. (938 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1378 aa)
	LOC109986925	A kinase (PRKA) anchor protein 11. (1866 aa)
	ENSLBEP00000028247	FERM domain-containing protein. (406 aa)
	ppp2r3c	Protein phosphatase 2, regulatory subunit B'', gamma. (457 aa)
	LOC109982836	Si:dkey-178k16.1. (918 aa)
	LOC109997853	Formin-like 1a. (970 aa)
	ENSLBEP00000030607	Formin homology 2 domain containing 3a. (555 aa)
	ENSLBEP00000030641	GBD/FH3 domain-containing protein. (145 aa)
	ENSLBEP00000030660	Formin_GBD_N domain-containing protein. (60 aa)
	LOC109998940	Erythrocyte membrane protein band 4.1a. (573 aa)
	ENSLBEP00000032334	FH2 domain-containing protein. (577 aa)
	ENSLBEP00000032958	ADP-ribosylation factor 6a; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	RAC1-2	Rac family small GTPase 1. (192 aa)
	ENSLBEP00000034706	Ras homolog gene family, member Gd. (112 aa)
	ENSLBEP00000035405	Formin_GBD_N domain-containing protein. (72 aa)
	rab13	RAB13, member RAS oncogene family. (200 aa)
	amotl2	Angiomotin like 2a. (699 aa)
	llgl2	LLGL scribble cell polarity complex component 2. (1005 aa)
	anln	Anillin, actin binding protein. (1162 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000000688	ENSLBEP00000000694	ENSLBEP00000000688	ENSLBEP00000000694	BTB domain-containing protein.	Si:dkey-6b12.5.	0.900
ENSLBEP00000000688	ENSLBEP00000003355	ENSLBEP00000000688	ENSLBEP00000003355	BTB domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.427
ENSLBEP00000000688	ENSLBEP00000011739	ENSLBEP00000000688	ENSLBEP00000011739	BTB domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000000688	ENSLBEP00000017996	ENSLBEP00000000688	ENSLBEP00000017996	BTB domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000000688	ENSLBEP00000032958	ENSLBEP00000000688	ENSLBEP00000032958	BTB domain-containing protein.	ADP-ribosylation factor 6a; Belongs to the small GTPase superfamily. Arf family.	0.427
ENSLBEP00000000688	LOC109994558	ENSLBEP00000000688	ENSLBEP00000000883	BTB domain-containing protein.	Uncharacterized protein.	0.488
ENSLBEP00000000688	LOC109997853	ENSLBEP00000000688	ENSLBEP00000030577	BTB domain-containing protein.	Formin-like 1a.	0.519
ENSLBEP00000000688	LOC109998040	ENSLBEP00000000688	ENSLBEP00000008913	BTB domain-containing protein.	PH domain-containing protein.	0.560
ENSLBEP00000000688	LOC110000554	ENSLBEP00000000688	ENSLBEP00000014528	BTB domain-containing protein.	Si:ch1073-416j23.1.	0.488
ENSLBEP00000000688	LOC110002500	ENSLBEP00000000688	ENSLBEP00000020968	BTB domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000000688	anln	ENSLBEP00000000688	ENSLBEP00000037223	BTB domain-containing protein.	Anillin, actin binding protein.	0.560
ENSLBEP00000000688	fmnl2	ENSLBEP00000000688	ENSLBEP00000027311	BTB domain-containing protein.	Formin-like 2a.	0.519
ENSLBEP00000000688	fmnl3	ENSLBEP00000000688	ENSLBEP00000015135	BTB domain-containing protein.	Formin-like 3.	0.519
ENSLBEP00000000688	nckap1	ENSLBEP00000000688	ENSLBEP00000003601	BTB domain-containing protein.	NCK-associated protein 1.	0.631
ENSLBEP00000000688	nckap1l	ENSLBEP00000000688	ENSLBEP00000020375	BTB domain-containing protein.	Uncharacterized protein.	0.631
ENSLBEP00000000688	pdcd6ip	ENSLBEP00000000688	ENSLBEP00000003637	BTB domain-containing protein.	Programmed cell death 6 interacting protein.	0.403
ENSLBEP00000000688	racgap1	ENSLBEP00000000688	ENSLBEP00000021410	BTB domain-containing protein.	Rac GTPase activating protein 1.	0.488
ENSLBEP00000000688	rock1	ENSLBEP00000000688	ENSLBEP00000027068	BTB domain-containing protein.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.494
ENSLBEP00000000688	rock2	ENSLBEP00000000688	ENSLBEP00000027555	BTB domain-containing protein.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.494
ENSLBEP00000000694	ENSLBEP00000000688	ENSLBEP00000000694	ENSLBEP00000000688	Si:dkey-6b12.5.	BTB domain-containing protein.	0.900