33 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gipc2	GIPC PDZ domain containing family, member 2. (397 aa)
	LOC109984294	Uncharacterized protein. (952 aa)
	LOC109982171	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (917 aa)
	LOC109983884	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1866 aa)
	cenpv	Centromere protein V. (206 aa)
	racgap1	Rac GTPase activating protein 1. (631 aa)
	cxcr5	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. (372 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (454 aa)
	LOC109994558	Uncharacterized protein. (539 aa)
	ect2	Epithelial cell transforming 2. (1061 aa)
	LOC109985914	Citron rho-interacting serine/threonine kinase b. (1595 aa)
	LOC110002263	Uncharacterized protein. (521 aa)
	cdc6	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (535 aa)
	ENSLBEP00000005021	Uncharacterized protein. (75 aa)
	KIF23	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (974 aa)
	LOC109997511	HP domain-containing protein. (1653 aa)
	LOC109990578	Supervillin d. (1290 aa)
	LOC109994148	Cell division cycle 42. (191 aa)
	CDC42	Cell division cycle 42. (203 aa)
	LOC110000554	Si:ch1073-416j23.1. (624 aa)
	LOC109995395	Uncharacterized protein. (191 aa)
	ENSLBEP00000017894	HPHLAWLY domain-containing protein. (665 aa)
	LOC109976684	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (385 aa)
	LOC109989856	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	LOC110004130	Aurora kinase B; Belongs to the protein kinase superfamily. (300 aa)
	svil	Supervillin a. (1735 aa)
	LOC109989260	GIPC PDZ domain containing family, member 1. (364 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (389 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC110003296	Uncharacterized protein. (138 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1184 aa)
	LOC109989709	GIPC PDZ domain containing family, member 3. (383 aa)
	LOC109981590	Uncharacterized protein. (542 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	CUL3	ENSLBEP00000014221	ENSLBEP00000030503	Cell division cycle 42.	Cullin 3; Belongs to the cullin family.	0.490
CDC42	LOC109983884	ENSLBEP00000014221	ENSLBEP00000020426	Cell division cycle 42.	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.552
CDC42	LOC109985914	ENSLBEP00000014221	ENSLBEP00000001406	Cell division cycle 42.	Citron rho-interacting serine/threonine kinase b.	0.552
CDC42	LOC109989856	ENSLBEP00000014221	ENSLBEP00000037002	Cell division cycle 42.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.490
CDC42	LOC109994558	ENSLBEP00000014221	ENSLBEP00000000883	Cell division cycle 42.	Uncharacterized protein.	0.871
CDC42	LOC109995395	ENSLBEP00000014221	ENSLBEP00000015957	Cell division cycle 42.	Uncharacterized protein.	0.815
CDC42	LOC110000554	ENSLBEP00000014221	ENSLBEP00000014528	Cell division cycle 42.	Si:ch1073-416j23.1.	0.871
CDC42	LOC110003296	ENSLBEP00000014221	ENSLBEP00000030398	Cell division cycle 42.	Uncharacterized protein.	0.816
CDC42	ect2	ENSLBEP00000014221	ENSLBEP00000001184	Cell division cycle 42.	Epithelial cell transforming 2.	0.824
CDC42	racgap1	ENSLBEP00000014221	ENSLBEP00000021410	Cell division cycle 42.	Rac GTPase activating protein 1.	0.871
CUL3	CDC42	ENSLBEP00000030503	ENSLBEP00000014221	Cullin 3; Belongs to the cullin family.	Cell division cycle 42.	0.490
CUL3	LOC109994148	ENSLBEP00000030503	ENSLBEP00000013739	Cullin 3; Belongs to the cullin family.	Cell division cycle 42.	0.490
CUL3	LOC109995395	ENSLBEP00000030503	ENSLBEP00000015957	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.490
CUL3	LOC110003296	ENSLBEP00000030503	ENSLBEP00000030398	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.490
CUL3	LOC110004130	ENSLBEP00000030503	ENSLBEP00000036056	Cullin 3; Belongs to the cullin family.	Aurora kinase B; Belongs to the protein kinase superfamily.	0.791
CUL3	cdc6	ENSLBEP00000030503	ENSLBEP00000001819	Cullin 3; Belongs to the cullin family.	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.	0.881
CUL3	poldip2	ENSLBEP00000030503	ENSLBEP00000030890	Cullin 3; Belongs to the cullin family.	Polymerase (DNA-directed), delta interacting protein 2.	0.455
KIF23	LOC109983884	ENSLBEP00000005538	ENSLBEP00000020426	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.651
KIF23	LOC109985914	ENSLBEP00000005538	ENSLBEP00000001406	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Citron rho-interacting serine/threonine kinase b.	0.651
KIF23	LOC109994558	ENSLBEP00000005538	ENSLBEP00000000883	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.992