(36 nodes) Synaptic transmission, glutamatergic network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109982956	N-ethylmaleimide-sensitive factor attachment protein, beta b. (296 aa)
	LOC109993374	Glutamate receptor, ionotropic, kainate 1b. (869 aa)
	slc17a6	Solute carrier family 17 member 6. (581 aa)
	ENSLBEP00000038784	MFS domain-containing protein. (381 aa)
	LOC110002040	Solute carrier family 17 member 8. (581 aa)
	ENSLBEP00000000519	Uncharacterized protein. (1002 aa)
	LOC109984025	Unc-13 homolog A. (1562 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	SLC17A6	Solute carrier family 17 member 6b. (581 aa)
	LOC110002298	Glutamate receptor, ionotropic, delta 1b. (879 aa)
	LOC109984175	Alsin Rho guanine nucleotide exchange factor ALS2 b. (1586 aa)
	zzef1	Zinc finger, ZZ-type with EF hand domain 1. (2851 aa)
	ENSLBEP00000010276	Uncharacterized protein. (74 aa)
	grid2	Glutamate receptor, ionotropic, delta 2. (933 aa)
	GRIK3	Glutamate ionotropic receptor kainate type subunit 3. (885 aa)
	UNC13C	Unc-13 homolog C. (2098 aa)
	LOC109988989	Uncharacterized protein. (1097 aa)
	LOC109988990	Glutamate ionotropic receptor kainate type subunit 5. (1078 aa)
	ENSLBEP00000016951	ANF_receptor domain-containing protein. (256 aa)
	LOC109988376	Glutamate receptor, ionotropic, kainate 1a. (912 aa)
	LOC109982784	Uncharacterized protein. (1584 aa)
	LOC109981552	Si:ch211-251b21.1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (465 aa)
	LOC109978483	N-ethylmaleimide-sensitive factor attachment protein, alpha b. (286 aa)
	LOC109986742	MFS domain-containing protein. (585 aa)
	LOC109989139	Uncharacterized protein. (1460 aa)
	napa	N-ethylmaleimide-sensitive factor attachment protein, alpha b. (295 aa)
	LOC109997120	Uncharacterized protein. (829 aa)
	GRIK2	Glutamate ionotropic receptor kainate type subunit 2. (911 aa)
	NAPB	N-ethylmaleimide-sensitive factor attachment protein, beta a. (295 aa)
	grid1	Glutamate receptor, ionotropic, delta 1a. (1015 aa)
	nf1	Neurofibromin 1b. (2672 aa)
	grik4	Glutamate receptor, ionotropic, kainate 4. (933 aa)
	unc13b	Uncharacterized protein. (1546 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (432 aa)
	SLC17A7	Solute carrier family 17 member 7. (636 aa)
	LOC109980664	Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (535 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000010276	ENSLBEP00000016951	ENSLBEP00000010276	ENSLBEP00000016951	Uncharacterized protein.	ANF_receptor domain-containing protein.	0.530
ENSLBEP00000010276	GRIK2	ENSLBEP00000010276	ENSLBEP00000025362	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 2.	0.526
ENSLBEP00000010276	GRIK3	ENSLBEP00000010276	ENSLBEP00000012053	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 3.	0.526
ENSLBEP00000010276	LOC109988376	ENSLBEP00000010276	ENSLBEP00000018629	Uncharacterized protein.	Glutamate receptor, ionotropic, kainate 1a.	0.526
ENSLBEP00000010276	LOC109988989	ENSLBEP00000010276	ENSLBEP00000014602	Uncharacterized protein.	Uncharacterized protein.	0.530
ENSLBEP00000010276	LOC109988990	ENSLBEP00000010276	ENSLBEP00000014882	Uncharacterized protein.	Glutamate ionotropic receptor kainate type subunit 5.	0.530
ENSLBEP00000010276	LOC109993374	ENSLBEP00000010276	ENSLBEP00000036619	Uncharacterized protein.	Glutamate receptor, ionotropic, kainate 1b.	0.526
ENSLBEP00000010276	LOC109997120	ENSLBEP00000010276	ENSLBEP00000024685	Uncharacterized protein.	Uncharacterized protein.	0.526
ENSLBEP00000010276	grik4	ENSLBEP00000010276	ENSLBEP00000026851	Uncharacterized protein.	Glutamate receptor, ionotropic, kainate 4.	0.530
ENSLBEP00000016951	ENSLBEP00000010276	ENSLBEP00000016951	ENSLBEP00000010276	ANF_receptor domain-containing protein.	Uncharacterized protein.	0.530
ENSLBEP00000016951	GRIK2	ENSLBEP00000016951	ENSLBEP00000025362	ANF_receptor domain-containing protein.	Glutamate ionotropic receptor kainate type subunit 2.	0.827
ENSLBEP00000016951	GRIK3	ENSLBEP00000016951	ENSLBEP00000012053	ANF_receptor domain-containing protein.	Glutamate ionotropic receptor kainate type subunit 3.	0.827
ENSLBEP00000016951	LOC109980664	ENSLBEP00000016951	ENSLBEP00000031446	ANF_receptor domain-containing protein.	Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.432
ENSLBEP00000016951	LOC109981552	ENSLBEP00000016951	ENSLBEP00000021503	ANF_receptor domain-containing protein.	Si:ch211-251b21.1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.473
ENSLBEP00000016951	LOC109988376	ENSLBEP00000016951	ENSLBEP00000018629	ANF_receptor domain-containing protein.	Glutamate receptor, ionotropic, kainate 1a.	0.827
ENSLBEP00000016951	LOC109993374	ENSLBEP00000016951	ENSLBEP00000036619	ANF_receptor domain-containing protein.	Glutamate receptor, ionotropic, kainate 1b.	0.827
ENSLBEP00000016951	LOC109997120	ENSLBEP00000016951	ENSLBEP00000024685	ANF_receptor domain-containing protein.	Uncharacterized protein.	0.827
ENSLBEP00000016951	LOC110002298	ENSLBEP00000016951	ENSLBEP00000004052	ANF_receptor domain-containing protein.	Glutamate receptor, ionotropic, delta 1b.	0.549
ENSLBEP00000016951	grid1	ENSLBEP00000016951	ENSLBEP00000025512	ANF_receptor domain-containing protein.	Glutamate receptor, ionotropic, delta 1a.	0.530
ENSLBEP00000016951	grid2	ENSLBEP00000016951	ENSLBEP00000010361	ANF_receptor domain-containing protein.	Glutamate receptor, ionotropic, delta 2.	0.530