STRINGSTRING
smpd1 smpd1 ENSLBEP00000010404 ENSLBEP00000010404 LOC109986022 LOC109986022 ambra1 ambra1 cdca2 cdca2 sympk sympk LOC109976742 LOC109976742 LOC110002047 LOC110002047 ptprc ptprc gba gba ENSLBEP00000034744 ENSLBEP00000034744 ankle2 ankle2 vrk3 vrk3 cdh5 cdh5 cnep1r1 cnep1r1 sppl3 sppl3 ptpa ptpa ENSLBEP00000027466 ENSLBEP00000027466 LOC110002615 LOC110002615 LOC109998849 LOC109998849 ppp1r7 ppp1r7 pink1 pink1 LOC109995483 LOC109995483 ppp1r42 ppp1r42 LOC109981103 LOC109981103
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (627 aa)
ENSLBEP00000010404Uncharacterized protein. (397 aa)
LOC109986022Protein phosphatase 1, regulatory subunit 15B. (568 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1144 aa)
cdca2PP1-binding domain-containing protein. (875 aa)
sympkSymplekin. (1223 aa)
LOC109976742Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (192 aa)
LOC110002047PDZ domain-containing protein. (164 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1151 aa)
gbaGlucosylceramidase. (526 aa)
ENSLBEP00000034744PKD domain-containing protein. (261 aa)
ankle2Ankyrin repeat and LEM domain containing 2. (974 aa)
vrk3VRK serine/threonine kinase 3. (484 aa)
cdh5Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (787 aa)
cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (125 aa)
sppl3Signal peptide peptidase 3. (381 aa)
ptpaSerine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (324 aa)
ENSLBEP00000027466PDZ domain-containing protein. (150 aa)
LOC110002615Uncharacterized protein. (1201 aa)
LOC109998849Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1316 aa)
ppp1r7Protein phosphatase 1, regulatory (inhibitor) subunit 7. (345 aa)
pink1PTEN induced kinase 1. (575 aa)
LOC109995483Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (300 aa)
LOC109981103Angiotensin II receptor, type 2; Belongs to the G-protein coupled receptor 1 family. (416 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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