(16 nodes) Egg coat network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109989646	Zona pellucida protein AX 1. (909 aa)
	LOC109985982	ZP domain-containing protein. (378 aa)
	LOC109989675	ZP domain-containing protein. (887 aa)
	LOC110003394	ZP domain-containing protein. (1328 aa)
	znf711	Zinc finger protein 711. (879 aa)
	LOC110001981	Uncharacterized protein. (469 aa)
	ENSLBEP00000037419	ZP domain-containing protein. (641 aa)
	LOC109980739	ZP domain-containing protein. (669 aa)
	LOC109980742	Zona pellucida protein AX 4. (709 aa)
	LOC109980733	ZP domain-containing protein. (769 aa)
	ENSLBEP00000038229	Uncharacterized protein. (483 aa)
	LOC110002121	ZP domain-containing protein. (476 aa)
	LOC110005845	ZP domain-containing protein. (383 aa)
	LOC109991439	Zona pellucida glycoprotein 2, like 2. (408 aa)
	fam107b	Family with sequence similarity 107 member B. (163 aa)
	LOC109978319	ZP domain-containing protein. (781 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000037419	LOC109985982	ENSLBEP00000037419	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000037419	LOC110002121	ENSLBEP00000037419	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000037419	LOC110005845	ENSLBEP00000037419	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000038229	LOC109985982	ENSLBEP00000038229	ENSLBEP00000006590	Uncharacterized protein.	ZP domain-containing protein.	0.595
ENSLBEP00000038229	LOC110002121	ENSLBEP00000038229	ENSLBEP00000038234	Uncharacterized protein.	ZP domain-containing protein.	0.696
ENSLBEP00000038229	LOC110005845	ENSLBEP00000038229	ENSLBEP00000018063	Uncharacterized protein.	ZP domain-containing protein.	0.595
LOC109978319	LOC109985982	ENSLBEP00000018038	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109978319	LOC110002121	ENSLBEP00000018038	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109978319	LOC110005845	ENSLBEP00000018038	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980733	LOC109985982	ENSLBEP00000037527	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980733	LOC110002121	ENSLBEP00000037527	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980733	LOC110005845	ENSLBEP00000037527	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980739	LOC109985982	ENSLBEP00000037454	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980739	LOC110002121	ENSLBEP00000037454	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980739	LOC110005845	ENSLBEP00000037454	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980742	LOC109985982	ENSLBEP00000037486	ENSLBEP00000006590	Zona pellucida protein AX 4.	ZP domain-containing protein.	0.576
LOC109980742	LOC110002121	ENSLBEP00000037486	ENSLBEP00000038234	Zona pellucida protein AX 4.	ZP domain-containing protein.	0.576
LOC109980742	LOC110005845	ENSLBEP00000037486	ENSLBEP00000018063	Zona pellucida protein AX 4.	ZP domain-containing protein.	0.576
LOC109985982	ENSLBEP00000037419	ENSLBEP00000006590	ENSLBEP00000037419	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109985982	ENSLBEP00000038229	ENSLBEP00000006590	ENSLBEP00000038229	ZP domain-containing protein.	Uncharacterized protein.	0.595