STRINGSTRING
pdgfrb pdgfrb mars1 mars1 LOC109981077 LOC109981077 SYAP1 SYAP1 flt3 flt3 pdgfra pdgfra LOC109982373 LOC109982373 errfi1 errfi1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1106 aa)
mars1Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (927 aa)
LOC109981077Platelet-derived growth factor receptor-like. (355 aa)
SYAP1Synapse associated protein 1. (354 aa)
flt3Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1021 aa)
pdgfraPlatelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1463 aa)
LOC109982373Synapse associated protein 1. (368 aa)
errfi1ERBB receptor feedback inhibitor 1a. (450 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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