(6 nodes) Swimming behavior network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109976284	Abhydrolase domain containing 12. (428 aa)
	LOC110002100	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (359 aa)
	atoh7	Atonal bHLH transcription factor 7. (143 aa)
	LOC109986856	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2207 aa)
	LOC110005162	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2388 aa)
	LOC110002626	ATP-binding cassette, sub-family D (ALD), member 1. (762 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109986856	LOC110002626	ENSLBEP00000023664	ENSLBEP00000027894	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	ATP-binding cassette, sub-family D (ALD), member 1.	0.583
LOC110002626	LOC109986856	ENSLBEP00000027894	ENSLBEP00000023664	ATP-binding cassette, sub-family D (ALD), member 1.	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.583
LOC110002626	LOC110005162	ENSLBEP00000027894	ENSLBEP00000025910	ATP-binding cassette, sub-family D (ALD), member 1.	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.583
LOC110005162	LOC110002626	ENSLBEP00000025910	ENSLBEP00000027894	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	ATP-binding cassette, sub-family D (ALD), member 1.	0.583