(12 nodes) Neurotransmitter binding network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109988019	NIPSNAP domain-containing protein. (286 aa)
	NIPSNAP2	Nipsnap homolog 2. (282 aa)
	ENSLBEP00000000559	Uncharacterized protein. (459 aa)
	LOC109986465	Si:ch73-380n15.2. (542 aa)
	ENSLBEP00000003676	Uncharacterized protein. (422 aa)
	LOC109984837	Uncharacterized protein. (492 aa)
	LOC110006072	Uncharacterized protein. (579 aa)
	LOC109986059	Nipsnap homolog 1 (C. elegans). (262 aa)
	grin3b	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1339 aa)
	LOC109986855	Cholinergic receptor, nicotinic, alpha 7 (neuronal). (510 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1093 aa)
	LOC109988668	Si:ch211-39a7.1. (572 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000000559	GRIN3A	ENSLBEP00000000559	ENSLBEP00000028585	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
ENSLBEP00000000559	LOC109986465	ENSLBEP00000000559	ENSLBEP00000001933	Uncharacterized protein.	Si:ch73-380n15.2.	0.666
ENSLBEP00000000559	grin3b	ENSLBEP00000000559	ENSLBEP00000012157	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
ENSLBEP00000003676	GRIN3A	ENSLBEP00000003676	ENSLBEP00000028585	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
ENSLBEP00000003676	LOC109986465	ENSLBEP00000003676	ENSLBEP00000001933	Uncharacterized protein.	Si:ch73-380n15.2.	0.664
ENSLBEP00000003676	grin3b	ENSLBEP00000003676	ENSLBEP00000012157	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
GRIN3A	ENSLBEP00000000559	ENSLBEP00000028585	ENSLBEP00000000559	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.492
GRIN3A	ENSLBEP00000003676	ENSLBEP00000028585	ENSLBEP00000003676	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.492
GRIN3A	LOC109984837	ENSLBEP00000028585	ENSLBEP00000008095	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.492
GRIN3A	LOC109986465	ENSLBEP00000028585	ENSLBEP00000001933	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Si:ch73-380n15.2.	0.492
GRIN3A	LOC109986855	ENSLBEP00000028585	ENSLBEP00000024141	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Cholinergic receptor, nicotinic, alpha 7 (neuronal).	0.492
GRIN3A	LOC109988668	ENSLBEP00000028585	ENSLBEP00000035635	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Si:ch211-39a7.1.	0.492
GRIN3A	LOC110006072	ENSLBEP00000028585	ENSLBEP00000009139	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Uncharacterized protein.	0.492
GRIN3A	grin3b	ENSLBEP00000028585	ENSLBEP00000012157	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.642
LOC109984837	GRIN3A	ENSLBEP00000008095	ENSLBEP00000028585	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
LOC109984837	LOC109986465	ENSLBEP00000008095	ENSLBEP00000001933	Uncharacterized protein.	Si:ch73-380n15.2.	0.663
LOC109984837	grin3b	ENSLBEP00000008095	ENSLBEP00000012157	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492
LOC109986465	ENSLBEP00000000559	ENSLBEP00000001933	ENSLBEP00000000559	Si:ch73-380n15.2.	Uncharacterized protein.	0.666
LOC109986465	ENSLBEP00000003676	ENSLBEP00000001933	ENSLBEP00000003676	Si:ch73-380n15.2.	Uncharacterized protein.	0.664
LOC109986465	GRIN3A	ENSLBEP00000001933	ENSLBEP00000028585	Si:ch73-380n15.2.	Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.492