(16 nodes) Axonal growth cone network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109995857	Uncharacterized protein. (259 aa)
	LOC109988188	Uncharacterized protein. (278 aa)
	LOC109984215	L1 cell adhesion molecule, paralog a. (1265 aa)
	LOC109988724	Si:ch211-1o7.3. (584 aa)
	ENSLBEP00000037432	Shootin 1. (472 aa)
	LOC110000313	Uncharacterized protein. (1203 aa)
	dcc	DCC netrin 1 receptor. (1412 aa)
	c9orf72	Zgc:100846. (462 aa)
	LOC110005162	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2388 aa)
	LOC109986856	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2207 aa)
	neo1	Neogenin 1b. (1445 aa)
	gpm6a	Glycoprotein M6Aa. (278 aa)
	LOC110002895	Uncharacterized protein. (1207 aa)
	cobl	Uncharacterized protein. (1596 aa)
	rtn4r	Reticulon 4 receptor. (466 aa)
	flrt3	Fibronectin leucine rich transmembrane 3. (651 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000037432	LOC109984215	ENSLBEP00000037432	ENSLBEP00000012404	Shootin 1.	L1 cell adhesion molecule, paralog a.	0.407
ENSLBEP00000037432	LOC110000313	ENSLBEP00000037432	ENSLBEP00000034629	Shootin 1.	Uncharacterized protein.	0.407
LOC109984215	ENSLBEP00000037432	ENSLBEP00000012404	ENSLBEP00000037432	L1 cell adhesion molecule, paralog a.	Shootin 1.	0.407
LOC109984215	LOC109988724	ENSLBEP00000012404	ENSLBEP00000037785	L1 cell adhesion molecule, paralog a.	Si:ch211-1o7.3.	0.407
LOC109984215	LOC109995857	ENSLBEP00000012404	ENSLBEP00000008411	L1 cell adhesion molecule, paralog a.	Uncharacterized protein.	0.407
LOC109988724	LOC109984215	ENSLBEP00000037785	ENSLBEP00000012404	Si:ch211-1o7.3.	L1 cell adhesion molecule, paralog a.	0.407
LOC109988724	LOC110000313	ENSLBEP00000037785	ENSLBEP00000034629	Si:ch211-1o7.3.	Uncharacterized protein.	0.407
LOC109995857	LOC109984215	ENSLBEP00000008411	ENSLBEP00000012404	Uncharacterized protein.	L1 cell adhesion molecule, paralog a.	0.407
LOC109995857	LOC110000313	ENSLBEP00000008411	ENSLBEP00000034629	Uncharacterized protein.	Uncharacterized protein.	0.407
LOC110000313	ENSLBEP00000037432	ENSLBEP00000034629	ENSLBEP00000037432	Uncharacterized protein.	Shootin 1.	0.407
LOC110000313	LOC109988724	ENSLBEP00000034629	ENSLBEP00000037785	Uncharacterized protein.	Si:ch211-1o7.3.	0.407
LOC110000313	LOC109995857	ENSLBEP00000034629	ENSLBEP00000008411	Uncharacterized protein.	Uncharacterized protein.	0.407