15 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109981514	Uncharacterized protein. (193 aa)
	arhgap24	Rho GTPase activating protein 24. (801 aa)
	LOC109989690	LRRCT domain-containing protein. (332 aa)
	ENSLBEP00000026279	Uncharacterized protein. (338 aa)
	LOC109989077	ADAM metallopeptidase domain 17a. (867 aa)
	ccn1	Cellular communication network factor 1. (374 aa)
	LOC109977914	Disintegrin domain-containing protein. (453 aa)
	LOC109993560	Uncharacterized protein. (202 aa)
	LOC109984918	Uncharacterized protein. (205 aa)
	LOC110001224	ADAM metallopeptidase domain 17b. (898 aa)
	LOC109990297	Uncharacterized protein. (193 aa)
	LOC109984913	Uncharacterized protein. (193 aa)
	LOC109980884	Ras homolog family member Ca. (196 aa)
	LOC109988716	Ajuba LIM protein. (721 aa)
	RHOB	Ras homolog family member B. (141 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109980884	LOC109984913	ENSLBEP00000002979	ENSLBEP00000010277	Ras homolog family member Ca.	Uncharacterized protein.	0.659
LOC109980884	arhgap24	ENSLBEP00000002979	ENSLBEP00000022398	Ras homolog family member Ca.	Rho GTPase activating protein 24.	0.601
LOC109981514	LOC109984913	ENSLBEP00000020602	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109981514	arhgap24	ENSLBEP00000020602	ENSLBEP00000022398	Uncharacterized protein.	Rho GTPase activating protein 24.	0.601
LOC109984913	LOC109980884	ENSLBEP00000010277	ENSLBEP00000002979	Uncharacterized protein.	Ras homolog family member Ca.	0.659
LOC109984913	LOC109981514	ENSLBEP00000010277	ENSLBEP00000020602	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109984913	LOC109984918	ENSLBEP00000010277	ENSLBEP00000012644	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109984913	LOC109990297	ENSLBEP00000010277	ENSLBEP00000027144	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109984913	LOC109993560	ENSLBEP00000010277	ENSLBEP00000010992	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109984913	RHOB	ENSLBEP00000010277	ENSLBEP00000026886	Uncharacterized protein.	Ras homolog family member B.	0.659
LOC109984913	arhgap24	ENSLBEP00000010277	ENSLBEP00000022398	Uncharacterized protein.	Rho GTPase activating protein 24.	0.601
LOC109984918	LOC109984913	ENSLBEP00000012644	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109984918	arhgap24	ENSLBEP00000012644	ENSLBEP00000022398	Uncharacterized protein.	Rho GTPase activating protein 24.	0.601
LOC109990297	LOC109984913	ENSLBEP00000027144	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109990297	arhgap24	ENSLBEP00000027144	ENSLBEP00000022398	Uncharacterized protein.	Rho GTPase activating protein 24.	0.601
LOC109993560	LOC109984913	ENSLBEP00000010992	ENSLBEP00000010277	Uncharacterized protein.	Uncharacterized protein.	0.659
LOC109993560	arhgap24	ENSLBEP00000010992	ENSLBEP00000022398	Uncharacterized protein.	Rho GTPase activating protein 24.	0.601
RHOB	LOC109984913	ENSLBEP00000026886	ENSLBEP00000010277	Ras homolog family member B.	Uncharacterized protein.	0.659
RHOB	arhgap24	ENSLBEP00000026886	ENSLBEP00000022398	Ras homolog family member B.	Rho GTPase activating protein 24.	0.601
arhgap24	LOC109980884	ENSLBEP00000022398	ENSLBEP00000002979	Rho GTPase activating protein 24.	Ras homolog family member Ca.	0.601