STRINGSTRING
LOC110003296 LOC110003296 ttc8 ttc8 LOC109992295 LOC109992295 lama1 lama1 LOC109994148 LOC109994148 CDC42 CDC42 PTK7 PTK7 LOC109995395 LOC109995395 LOC109986856 LOC109986856 CDH2 CDH2 LOC110005162 LOC110005162 CDH2-2 CDH2-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC110003296Uncharacterized protein. (138 aa)
ttc8Tetratricopeptide repeat domain 8. (505 aa)
LOC109992295SH3-domain binding protein 1. (710 aa)
lama1Laminin, alpha 1. (2848 aa)
LOC109994148Cell division cycle 42. (191 aa)
CDC42Cell division cycle 42. (203 aa)
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1010 aa)
LOC109995395Uncharacterized protein. (191 aa)
LOC109986856Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2207 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (910 aa)
LOC110005162Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2388 aa)
CDH2-2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (915 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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