STRINGSTRING
LOC109992295 LOC109992295 CDH2-2 CDH2-2 LOC110003296 LOC110003296 LOC110005162 LOC110005162 CDH2 CDH2 LOC109986856 LOC109986856 LOC109995395 LOC109995395 PTK7 PTK7 CDC42 CDC42 LOC109994148 LOC109994148 lama1 lama1 ttc8 ttc8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109992295SH3-domain binding protein 1. (710 aa)
CDH2-2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (915 aa)
LOC110003296Uncharacterized protein. (138 aa)
LOC110005162Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2388 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (910 aa)
LOC109986856Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2207 aa)
LOC109995395Uncharacterized protein. (191 aa)
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1010 aa)
CDC42Cell division cycle 42. (203 aa)
LOC109994148Cell division cycle 42. (191 aa)
lama1Laminin, alpha 1. (2848 aa)
ttc8Tetratricopeptide repeat domain 8. (505 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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