STRINGSTRING
LOC109982928 LOC109982928 DDAH1 DDAH1 asl asl ddah2 ddah2 ptx3 ptx3 il1b il1b LOC109988446 LOC109988446 LOC109990792 LOC109990792 LOC109990800 LOC109990800 ENSLBEP00000025231 ENSLBEP00000025231 TLR5 TLR5 LOC109982952 LOC109982952
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109982928Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (736 aa)
DDAH1Dimethylarginine dimethylaminohydrolase 1. (168 aa)
aslArgininosuccinate lyase. (465 aa)
ddah2Dimethylarginine dimethylaminohydrolase 2. (292 aa)
ptx3Pentraxin 3, long b. (464 aa)
il1bInterleukin-1. (251 aa)
LOC109988446LRRCT domain-containing protein. (643 aa)
LOC109990792Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (485 aa)
LOC109990800Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (482 aa)
ENSLBEP00000025231Uncharacterized protein. (215 aa)
TLR5Toll like receptor 5; Belongs to the Toll-like receptor family. (890 aa)
LOC109982952Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (722 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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