(62 nodes) Fat cell differentiation network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	plac8	Placenta associated 8, tandem duplicate 1. (104 aa)
	ENSLBEP00000037064	Uncharacterized protein. (91 aa)
	LOC109989822	Zgc:103681. (339 aa)
	LOC110004120	E1A binding protein p300 b. (2680 aa)
	LOC109984493	Zinc finger protein 516. (892 aa)
	ptgs2	Prostaglandin-endoperoxide synthase 2b. (606 aa)
	ctbp2	Uncharacterized protein. (988 aa)
	LOC109982974	Aldedh domain-containing protein. (525 aa)
	LOC109993263	Activating transcription factor 5a. (506 aa)
	bbs1	Bardet-Biedl syndrome 1. (584 aa)
	LOC109994976	STEAP family member 4. (481 aa)
	LOC109998408	Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (310 aa)
	steap4	STEAP family member 4. (472 aa)
	LOC109980655	Uncharacterized protein. (112 aa)
	LOC109987906	Uncharacterized protein. (1160 aa)
	NR4A1	Nuclear receptor subfamily 4 group A member 1. (587 aa)
	ENSLBEP00000029506	Reticulophagy regulator 1. (268 aa)
	ENSLBEP00000029399	CCDC144C domain-containing protein. (313 aa)
	ENSLBEP00000029382	DUF3496 domain-containing protein. (482 aa)
	ENSLBEP00000028636	Suppressor of cytokine signaling 1a. (209 aa)
	nr4a2	Nuclear receptor subfamily 4, group A, member 2b. (597 aa)
	metrnl	Meteorin like, glial cell differentiation regulator a. (286 aa)
	tmem120b	Transmembrane protein 120B. (338 aa)
	prdm16	Si:ch211-263k4.2. (1140 aa)
	ENSLBEP00000026279	Uncharacterized protein. (338 aa)
	LOC109989690	LRRCT domain-containing protein. (332 aa)
	lamb3	Uncharacterized protein. (1157 aa)
	trim32	Tripartite motif containing 32. (680 aa)
	bbs4	Bardet-Biedl syndrome 4. (533 aa)
	mkks	McKusick-Kaufman syndrome. (567 aa)
	ENSLBEP00000022272	TAZ-type domain-containing protein. (362 aa)
	bbs7	Bardet-Biedl syndrome 7. (713 aa)
	ENSLBEP00000020961	Uncharacterized protein. (767 aa)
	LOC109986406	Nuclear receptor subfamily 4, group A, member 1. (568 aa)
	LOC110004651	Reticulophagy regulator 1. (329 aa)
	LOC109986397	CCAAT enhancer binding protein beta. (294 aa)
	ENSLBEP00000017636	Uncharacterized protein. (108 aa)
	sirt1	Sirtuin 1. (681 aa)
	LOC109981088	Adrenoceptor beta 2, surface a. (401 aa)
	LOC109979388	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (309 aa)
	ENSLBEP00000016000	Bardet-Biedl syndrome 9. (445 aa)
	cebpd	CCAAT/enhancer-binding protein. (286 aa)
	ENSLBEP00000014993	Uncharacterized protein. (99 aa)
	tmem120a	Transmembrane protein 120A. (347 aa)
	ENSLBEP00000011108	Family with sequence similarity 120B. (485 aa)
	LOC109983694	G_PROTEIN_RECEP_F1_2 domain-containing protein. (335 aa)
	ctbp1	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (443 aa)
	cntn2	Contactin 2. (1069 aa)
	LOC109984160	Uncharacterized protein. (575 aa)
	ENSLBEP00000007660	Uncharacterized protein. (423 aa)
	ZNF516	Zinc finger protein 516. (1093 aa)
	LOC109993531	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (448 aa)
	LOC109975584	Uncharacterized protein. (645 aa)
	adrb1	Adrenoceptor beta 1. (407 aa)
	LOC109990715	BSCL2 lipid droplet biogenesis associated, seipin. (318 aa)
	LOC109992331	Activating transcription factor 5b. (469 aa)
	ep300	E1A binding protein p300 a. (2577 aa)
	nr4a3	Nuclear receptor subfamily 4, group A, member 3. (673 aa)
	ENSLBEP00000002562	Uncharacterized protein. (99 aa)
	ENSLBEP00000001919	Bardet-Biedl syndrome 12. (623 aa)
	aldh6a1	Aldehyde dehydrogenase 6 family member A1. (525 aa)
	ttc8	Tetratricopeptide repeat domain 8. (505 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000001919	ENSLBEP00000016000	ENSLBEP00000001919	ENSLBEP00000016000	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 9.	0.647
ENSLBEP00000001919	ENSLBEP00000017636	ENSLBEP00000001919	ENSLBEP00000017636	Bardet-Biedl syndrome 12.	Uncharacterized protein.	0.844
ENSLBEP00000001919	bbs1	ENSLBEP00000001919	ENSLBEP00000032407	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 1.	0.632
ENSLBEP00000001919	bbs4	ENSLBEP00000001919	ENSLBEP00000023312	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 4.	0.627
ENSLBEP00000001919	bbs7	ENSLBEP00000001919	ENSLBEP00000021281	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 7.	0.775
ENSLBEP00000001919	mkks	ENSLBEP00000001919	ENSLBEP00000022702	Bardet-Biedl syndrome 12.	McKusick-Kaufman syndrome.	0.844
ENSLBEP00000001919	ttc8	ENSLBEP00000001919	ENSLBEP00000001019	Bardet-Biedl syndrome 12.	Tetratricopeptide repeat domain 8.	0.504
ENSLBEP00000016000	ENSLBEP00000001919	ENSLBEP00000016000	ENSLBEP00000001919	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 12.	0.647
ENSLBEP00000016000	ENSLBEP00000017636	ENSLBEP00000016000	ENSLBEP00000017636	Bardet-Biedl syndrome 9.	Uncharacterized protein.	0.460
ENSLBEP00000016000	LOC109975584	ENSLBEP00000016000	ENSLBEP00000006145	Bardet-Biedl syndrome 9.	Uncharacterized protein.	0.647
ENSLBEP00000016000	bbs1	ENSLBEP00000016000	ENSLBEP00000032407	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 1.	0.997
ENSLBEP00000016000	bbs4	ENSLBEP00000016000	ENSLBEP00000023312	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 4.	0.997
ENSLBEP00000016000	bbs7	ENSLBEP00000016000	ENSLBEP00000021281	Bardet-Biedl syndrome 9.	Bardet-Biedl syndrome 7.	0.998
ENSLBEP00000016000	mkks	ENSLBEP00000016000	ENSLBEP00000022702	Bardet-Biedl syndrome 9.	McKusick-Kaufman syndrome.	0.460
ENSLBEP00000016000	trim32	ENSLBEP00000016000	ENSLBEP00000025834	Bardet-Biedl syndrome 9.	Tripartite motif containing 32.	0.420
ENSLBEP00000016000	ttc8	ENSLBEP00000016000	ENSLBEP00000001019	Bardet-Biedl syndrome 9.	Tetratricopeptide repeat domain 8.	0.996
ENSLBEP00000017636	ENSLBEP00000001919	ENSLBEP00000017636	ENSLBEP00000001919	Uncharacterized protein.	Bardet-Biedl syndrome 12.	0.844
ENSLBEP00000017636	ENSLBEP00000016000	ENSLBEP00000017636	ENSLBEP00000016000	Uncharacterized protein.	Bardet-Biedl syndrome 9.	0.460
ENSLBEP00000017636	ENSLBEP00000029382	ENSLBEP00000017636	ENSLBEP00000029382	Uncharacterized protein.	DUF3496 domain-containing protein.	0.452
ENSLBEP00000017636	ENSLBEP00000029399	ENSLBEP00000017636	ENSLBEP00000029399	Uncharacterized protein.	CCDC144C domain-containing protein.	0.452