(12 nodes) Macrophage chemotaxis network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000033705	Galectin. (281 aa)
	LOC109983424	TAFA chemokine like family member 4b. (135 aa)
	LOC109995876	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (418 aa)
	LOC109984927	TAFA chemokine like family member 3. (169 aa)
	CKLF	Chemokine like factor. (150 aa)
	ENSLBEP00000016916	Galectin. (136 aa)
	trim33	Tripartite motif containing 33. (866 aa)
	LOC109981026	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (412 aa)
	LOC110003091	Galectin. (296 aa)
	LOC109984338	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (448 aa)
	LOC109987072	Endothelin 2. (219 aa)
	LOC110001247	Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family. (365 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109981026	LOC109984338	ENSLBEP00000020654	ENSLBEP00000026402	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	0.834
LOC109981026	LOC109987072	ENSLBEP00000020654	ENSLBEP00000001935	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.903
LOC109981026	LOC109995876	ENSLBEP00000020654	ENSLBEP00000006376	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	0.833
LOC109984338	LOC109981026	ENSLBEP00000026402	ENSLBEP00000020654	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.834
LOC109984338	LOC109987072	ENSLBEP00000026402	ENSLBEP00000001935	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.899
LOC109987072	LOC109981026	ENSLBEP00000001935	ENSLBEP00000020654	Endothelin 2.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.903
LOC109987072	LOC109984338	ENSLBEP00000001935	ENSLBEP00000026402	Endothelin 2.	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	0.899
LOC109987072	LOC109995876	ENSLBEP00000001935	ENSLBEP00000006376	Endothelin 2.	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	0.899
LOC109995876	LOC109981026	ENSLBEP00000006376	ENSLBEP00000020654	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.833
LOC109995876	LOC109987072	ENSLBEP00000006376	ENSLBEP00000001935	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.899