(10 nodes) Lymphocyte chemotaxis network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109987769	Chemokine (C-C motif) ligand 25b. (100 aa)
	CKLF	Chemokine like factor. (150 aa)
	gas6	Growth arrest-specific 6. (627 aa)
	LOC109976314	C-C motif chemokine. (103 aa)
	LOC109989114	SCY domain-containing protein. (112 aa)
	LOC109983961	Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family. (342 aa)
	LOC109983967	G protein-coupled receptor 183a; Belongs to the G-protein coupled receptor 1 family. (384 aa)
	ENSLBEP00000002730	C-C motif chemokine. (115 aa)
	LOC109975478	Cytochrome P450, family 7, subfamily B, polypeptide 1. (537 aa)
	ccl17	SCY domain-containing protein. (98 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000002730	LOC109976314	ENSLBEP00000002730	ENSLBEP00000021617	C-C motif chemokine.	C-C motif chemokine.	0.504
ENSLBEP00000002730	LOC109987769	ENSLBEP00000002730	ENSLBEP00000008897	C-C motif chemokine.	Chemokine (C-C motif) ligand 25b.	0.504
ENSLBEP00000002730	LOC109989114	ENSLBEP00000002730	ENSLBEP00000021973	C-C motif chemokine.	SCY domain-containing protein.	0.424
LOC109976314	ENSLBEP00000002730	ENSLBEP00000021617	ENSLBEP00000002730	C-C motif chemokine.	C-C motif chemokine.	0.504
LOC109976314	LOC109989114	ENSLBEP00000021617	ENSLBEP00000021973	C-C motif chemokine.	SCY domain-containing protein.	0.859
LOC109976314	ccl17	ENSLBEP00000021617	ENSLBEP00000008696	C-C motif chemokine.	SCY domain-containing protein.	0.685
LOC109987769	ENSLBEP00000002730	ENSLBEP00000008897	ENSLBEP00000002730	Chemokine (C-C motif) ligand 25b.	C-C motif chemokine.	0.504
LOC109987769	LOC109989114	ENSLBEP00000008897	ENSLBEP00000021973	Chemokine (C-C motif) ligand 25b.	SCY domain-containing protein.	0.859
LOC109987769	ccl17	ENSLBEP00000008897	ENSLBEP00000008696	Chemokine (C-C motif) ligand 25b.	SCY domain-containing protein.	0.685
LOC109989114	ENSLBEP00000002730	ENSLBEP00000021973	ENSLBEP00000002730	SCY domain-containing protein.	C-C motif chemokine.	0.424
LOC109989114	LOC109976314	ENSLBEP00000021973	ENSLBEP00000021617	SCY domain-containing protein.	C-C motif chemokine.	0.859
LOC109989114	LOC109987769	ENSLBEP00000021973	ENSLBEP00000008897	SCY domain-containing protein.	Chemokine (C-C motif) ligand 25b.	0.859
ccl17	LOC109976314	ENSLBEP00000008696	ENSLBEP00000021617	SCY domain-containing protein.	C-C motif chemokine.	0.685
ccl17	LOC109987769	ENSLBEP00000008696	ENSLBEP00000008897	SCY domain-containing protein.	Chemokine (C-C motif) ligand 25b.	0.685