STRINGSTRING
LOC109975536 LOC109975536 wdr19 wdr19 LOC109988849 LOC109988849 rbm24 rbm24 disp1 disp1 alx1 alx1 LOC109979978 LOC109979978 LOC109986451 LOC109986451 LOC109984751 LOC109984751 alcam alcam LOC110005360 LOC110005360 RING1 RING1 gata3 gata3 fst fst ENSLBEP00000031686 ENSLBEP00000031686 LOC109999521 LOC109999521 LOC110000840 LOC110000840 setd2 setd2 rad21 rad21 LOC110001377 LOC110001377 bmp2 bmp2 rnf2 rnf2 TGFBR2 TGFBR2 pdgfrb pdgfrb ENSLBEP00000027827 ENSLBEP00000027827 s1pr2 s1pr2 hand2 hand2 fgf3 fgf3 LOC109989161 LOC109989161 LOC110001878 LOC110001878 mab21l2 mab21l2 LOC109981154 LOC109981154 LOC109998822 LOC109998822 ENSLBEP00000024381 ENSLBEP00000024381 dlx2 dlx2 dlx1 dlx1 ENSLBEP00000023548 ENSLBEP00000023548 LOC109998255 LOC109998255 pitx2 pitx2 LOC109981089 LOC109981089 LOC109987197 LOC109987197 LOC109998011 LOC109998011 ift140 ift140 LOC109985592 LOC109985592 LOC110002449 LOC110002449 LOC109991924 LOC109991924 tbx1 tbx1 wnt4 wnt4 LOC109995371 LOC109995371 shh shh nbas nbas dlx3 dlx3 ALX3 ALX3 fam20b fam20b mmachc mmachc leo1 leo1 dlx5 dlx5 egr1 egr1 LOC109975556 LOC109975556
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109975536LEO1 homolog, Paf1/RNA polymerase II complex component. (711 aa)
wdr19WD repeat domain 19. (1341 aa)
LOC109988849Mediator complex subunit 12. (2054 aa)
rbm24RNA binding motif protein 24a. (232 aa)
disp1Dispatched homolog 1 (Drosophila). (1610 aa)
alx1ALX homeobox 1. (320 aa)
LOC109979978N-acetylglucosamine-1-phosphate transferase subunits alpha and beta. (766 aa)
LOC109986451RNA binding motif protein 24b. (237 aa)
LOC109984751Mab-21-like 1. (359 aa)
alcamUncharacterized protein. (561 aa)
LOC110005360IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (610 aa)
RING1Ring finger protein 1. (406 aa)
gata3GATA binding protein 3. (439 aa)
fstFollistatin a. (348 aa)
ENSLBEP00000031686Uncharacterized protein. (655 aa)
LOC109999521Activated leukocyte cell adhesion molecule b. (569 aa)
LOC110000840Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (485 aa)
setd2SET domain containing 2, histone lysine methyltransferase. (2606 aa)
rad21RAD21 cohesin complex component a. (636 aa)
LOC110001377Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
bmp2Bone morphogenetic protein 2b. (422 aa)
rnf2Ring finger protein 2. (342 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (555 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1106 aa)
ENSLBEP00000027827Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (305 aa)
s1pr2Sphingosine-1-phosphate receptor 2; Belongs to the G-protein coupled receptor 1 family. (374 aa)
hand2Heart and neural crest derivatives expressed 2. (250 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
LOC109989161Nipped-B protein. (2314 aa)
LOC110001878Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. (512 aa)
mab21l2Mab-21-like 2. (359 aa)
LOC109981154Nipped-B protein. (2473 aa)
LOC109998822Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (735 aa)
ENSLBEP00000024381Uncharacterized protein. (102 aa)
dlx2Distal-less homeobox 2b. (273 aa)
dlx1Distal-less homeobox 1a. (253 aa)
ENSLBEP00000023548Uncharacterized protein. (250 aa)
LOC109998255Sharpin and rbck1 related. (710 aa)
pitx2Homeobox protein. (313 aa)
LOC109981089RNA polymerase I and III subunit D. (114 aa)
LOC109987197Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
LOC109998011Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (371 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1447 aa)
LOC109985592RAD21 cohesin complex component like 1. (534 aa)
LOC110002449Uncharacterized protein. (636 aa)
LOC109991924Uncharacterized protein. (325 aa)
tbx1T-box transcription factor 1. (519 aa)
wnt4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
LOC109995371IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (625 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (397 aa)
nbasNeuroblastoma amplified sequence. (2371 aa)
dlx3Distal-less homeobox 3b. (280 aa)
ALX3ALX homeobox 3. (369 aa)
fam20bFAM20B glycosaminoglycan xylosylkinase. (409 aa)
mmachcMetabolism of cobalamin associated C. (265 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (669 aa)
dlx5Distal-less homeobox 5a. (285 aa)
egr1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (510 aa)
LOC109975556Uncharacterized protein. (1269 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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