STRINGSTRING
LOC109988849 LOC109988849 shh shh LOC109987197 LOC109987197 LOC109998822 LOC109998822 fgf3 fgf3 ENSLBEP00000027827 ENSLBEP00000027827 gata3 gata3 pdgfrb pdgfrb LOC109986451 LOC109986451 rbm24 rbm24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109988849Mediator complex subunit 12. (2054 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (397 aa)
LOC109987197Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
LOC109998822Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (735 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (247 aa)
ENSLBEP00000027827Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (305 aa)
gata3GATA binding protein 3. (439 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1106 aa)
LOC109986451RNA binding motif protein 24b. (237 aa)
rbm24RNA binding motif protein 24a. (232 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.