(36 nodes) Regulation of defense response to virus by host network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109992514	RING-type domain-containing protein. (584 aa)
	IL12B	Interleukin 12B, b. (327 aa)
	ENSLBEP00000002077	Tripartite motif containing 44. (272 aa)
	ENSLBEP00000002674	CARD domain-containing protein. (93 aa)
	LOC110001082	Uncharacterized protein. (461 aa)
	LOC109993484	BZIP domain-containing protein. (502 aa)
	ENSLBEP00000009242	RING-type domain-containing protein. (223 aa)
	zdhhc1	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (562 aa)
	ENSLBEP00000011198	Pyrin domain-containing protein. (191 aa)
	ENSLBEP00000011609	RING-type domain-containing protein. (316 aa)
	rnf216	Ring finger protein 216. (1117 aa)
	LOC109982072	Si:dkey-3h3.3. (474 aa)
	ENSLBEP00000013847	CARD domain-containing protein. (99 aa)
	ENSLBEP00000014596	CARD domain-containing protein. (98 aa)
	traf3ip2	SEFIR domain-containing protein. (444 aa)
	pqbp1	Polyglutamine binding protein 1. (225 aa)
	LOC109994785	RING-type domain-containing protein. (206 aa)
	LOC109994802	Zgc:66440. (369 aa)
	LOC110005080	Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
	ercc6	Excision repair cross-complementation group 6. (1440 aa)
	ENSLBEP00000021486	CARD domain-containing protein. (103 aa)
	ENSLBEP00000022369	CARD domain-containing protein. (92 aa)
	ENSLBEP00000022731	SEFIR domain-containing protein. (113 aa)
	zc3h12a	Si:dkey-206d17.12. (590 aa)
	LOC109980076	Uncharacterized protein. (228 aa)
	ENSLBEP00000023556	RING-type domain-containing protein. (521 aa)
	LOC109993147	RING-type domain-containing protein. (298 aa)
	ENSLBEP00000025063	Mitochondrial E3 ubiquitin protein ligase 1. (335 aa)
	ENSLBEP00000029731	CARD domain-containing protein. (92 aa)
	LOC109981931	TRAF3 interacting protein 2-like. (430 aa)
	tomm70	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (577 aa)
	LOC109994983	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (394 aa)
	EIF2AK4	Eukaryotic translation initiation factor 2 alpha kinase 4. (1655 aa)
	LOC109999113	Zinc finger CCCH-type containing 12A. (627 aa)
	LOC109987580	SEFIR domain-containing protein. (448 aa)
	LOC109979646	Uncharacterized protein. (342 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000009242	LOC109982072	ENSLBEP00000009242	ENSLBEP00000013699	RING-type domain-containing protein.	Si:dkey-3h3.3.	0.649
ENSLBEP00000009242	LOC109994785	ENSLBEP00000009242	ENSLBEP00000017478	RING-type domain-containing protein.	RING-type domain-containing protein.	0.648
ENSLBEP00000009242	LOC109994802	ENSLBEP00000009242	ENSLBEP00000017520	RING-type domain-containing protein.	Zgc:66440.	0.672
ENSLBEP00000011609	tomm70	ENSLBEP00000011609	ENSLBEP00000031803	RING-type domain-containing protein.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.624
ENSLBEP00000022731	rnf216	ENSLBEP00000022731	ENSLBEP00000012799	SEFIR domain-containing protein.	Ring finger protein 216.	0.448
ENSLBEP00000023556	LOC109982072	ENSLBEP00000023556	ENSLBEP00000013699	RING-type domain-containing protein.	Si:dkey-3h3.3.	0.675
ENSLBEP00000023556	LOC109994785	ENSLBEP00000023556	ENSLBEP00000017478	RING-type domain-containing protein.	RING-type domain-containing protein.	0.648
ENSLBEP00000023556	LOC109994802	ENSLBEP00000023556	ENSLBEP00000017520	RING-type domain-containing protein.	Zgc:66440.	0.688
ENSLBEP00000025063	tomm70	ENSLBEP00000025063	ENSLBEP00000031803	Mitochondrial E3 ubiquitin protein ligase 1.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.624
IL12B	LOC109980076	ENSLBEP00000001754	ENSLBEP00000023334	Interleukin 12B, b.	Uncharacterized protein.	0.776
LOC109980076	IL12B	ENSLBEP00000023334	ENSLBEP00000001754	Uncharacterized protein.	Interleukin 12B, b.	0.776
LOC109981931	rnf216	ENSLBEP00000031528	ENSLBEP00000012799	TRAF3 interacting protein 2-like.	Ring finger protein 216.	0.448
LOC109982072	ENSLBEP00000009242	ENSLBEP00000013699	ENSLBEP00000009242	Si:dkey-3h3.3.	RING-type domain-containing protein.	0.649
LOC109982072	ENSLBEP00000023556	ENSLBEP00000013699	ENSLBEP00000023556	Si:dkey-3h3.3.	RING-type domain-containing protein.	0.675
LOC109982072	LOC109992514	ENSLBEP00000013699	ENSLBEP00000023682	Si:dkey-3h3.3.	RING-type domain-containing protein.	0.675
LOC109987580	rnf216	ENSLBEP00000038379	ENSLBEP00000012799	SEFIR domain-containing protein.	Ring finger protein 216.	0.448
LOC109992514	LOC109982072	ENSLBEP00000023682	ENSLBEP00000013699	RING-type domain-containing protein.	Si:dkey-3h3.3.	0.675
LOC109992514	LOC109994785	ENSLBEP00000023682	ENSLBEP00000017478	RING-type domain-containing protein.	RING-type domain-containing protein.	0.648
LOC109992514	LOC109994802	ENSLBEP00000023682	ENSLBEP00000017520	RING-type domain-containing protein.	Zgc:66440.	0.688
LOC109993147	tomm70	ENSLBEP00000025007	ENSLBEP00000031803	RING-type domain-containing protein.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.624