(20 nodes) Regulation of antigen receptor-mediated signaling pathway network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109986636	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4. (480 aa)
	card11	Caspase recruitment domain family, member 11. (1027 aa)
	LOC109996372	RAB29, member RAS oncogene family. (205 aa)
	ENSLBEP00000007746	MALT paracaspase 2. (537 aa)
	ptprc	Protein tyrosine phosphatase receptor type C. (1151 aa)
	LOC109991658	MALT paracaspase 1. (857 aa)
	LOC109992234	Solute carrier family 39 member 10. (833 aa)
	ENSLBEP00000032872	Uncharacterized protein. (113 aa)
	ENSLBEP00000032857	Uncharacterized protein. (158 aa)
	pawr	PRKC, apoptosis, WT1, regulator. (419 aa)
	LOC109995561	Ring finger and CCCH-type domains 1b. (1115 aa)
	LOC109985676	Phosphohistidine phosphatase 1. (128 aa)
	RAB29	Ras-related protein Rab-7L1-like. (205 aa)
	LOC109994304	Si:dkey-51e6.1. (144 aa)
	LOC109982165	MALT paracaspase 3. (678 aa)
	ENSLBEP00000022637	Si:ch211-25d12.7. (224 aa)
	tespa1	KRAP_IP3R_bind domain-containing protein. (678 aa)
	sh2d1a	SH2 domain containing 1A duplicate b. (156 aa)
	cd226	CD226 molecule. (291 aa)
	LOC109998122	CKLF-like MARVEL transmembrane domain containing 3. (171 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000007746	LOC109982165	ENSLBEP00000007746	ENSLBEP00000024393	MALT paracaspase 2.	MALT paracaspase 3.	0.850
ENSLBEP00000007746	LOC109991658	ENSLBEP00000007746	ENSLBEP00000034753	MALT paracaspase 2.	MALT paracaspase 1.	0.843
ENSLBEP00000007746	card11	ENSLBEP00000007746	ENSLBEP00000013436	MALT paracaspase 2.	Caspase recruitment domain family, member 11.	0.979
LOC109982165	ENSLBEP00000007746	ENSLBEP00000024393	ENSLBEP00000007746	MALT paracaspase 3.	MALT paracaspase 2.	0.850
LOC109982165	LOC109991658	ENSLBEP00000024393	ENSLBEP00000034753	MALT paracaspase 3.	MALT paracaspase 1.	0.844
LOC109982165	card11	ENSLBEP00000024393	ENSLBEP00000013436	MALT paracaspase 3.	Caspase recruitment domain family, member 11.	0.979
LOC109985676	LOC109986636	ENSLBEP00000025954	ENSLBEP00000014152	Phosphohistidine phosphatase 1.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.	0.438
LOC109986636	LOC109985676	ENSLBEP00000014152	ENSLBEP00000025954	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.	Phosphohistidine phosphatase 1.	0.438
LOC109986636	LOC109994304	ENSLBEP00000014152	ENSLBEP00000024544	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.	Si:dkey-51e6.1.	0.438
LOC109991658	ENSLBEP00000007746	ENSLBEP00000034753	ENSLBEP00000007746	MALT paracaspase 1.	MALT paracaspase 2.	0.843
LOC109991658	LOC109982165	ENSLBEP00000034753	ENSLBEP00000024393	MALT paracaspase 1.	MALT paracaspase 3.	0.844
LOC109991658	card11	ENSLBEP00000034753	ENSLBEP00000013436	MALT paracaspase 1.	Caspase recruitment domain family, member 11.	0.979
LOC109994304	LOC109986636	ENSLBEP00000024544	ENSLBEP00000014152	Si:dkey-51e6.1.	Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.	0.438
card11	ENSLBEP00000007746	ENSLBEP00000013436	ENSLBEP00000007746	Caspase recruitment domain family, member 11.	MALT paracaspase 2.	0.979
card11	LOC109982165	ENSLBEP00000013436	ENSLBEP00000024393	Caspase recruitment domain family, member 11.	MALT paracaspase 3.	0.979
card11	LOC109991658	ENSLBEP00000013436	ENSLBEP00000034753	Caspase recruitment domain family, member 11.	MALT paracaspase 1.	0.979
cd226	tespa1	ENSLBEP00000018360	ENSLBEP00000019623	CD226 molecule.	KRAP_IP3R_bind domain-containing protein.	0.428
ptprc	sh2d1a	ENSLBEP00000036424	ENSLBEP00000019534	Protein tyrosine phosphatase receptor type C.	SH2 domain containing 1A duplicate b.	0.512
sh2d1a	ptprc	ENSLBEP00000019534	ENSLBEP00000036424	SH2 domain containing 1A duplicate b.	Protein tyrosine phosphatase receptor type C.	0.512
tespa1	cd226	ENSLBEP00000019623	ENSLBEP00000018360	KRAP_IP3R_bind domain-containing protein.	CD226 molecule.	0.428