(74 nodes) Negative regulation of oxidoreductase activity network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000017188	Uncharacterized protein. (231 aa)
	ENSLBEP00000038847	annotation not available (109 aa)
	ENSLBEP00000038817	annotation not available (109 aa)
	ENSLBEP00000038780	annotation not available (109 aa)
	ENSLBEP00000038769	Uncharacterized protein. (96 aa)
	ENSLBEP00000038700	Uncharacterized protein. (130 aa)
	ENSLBEP00000038683	annotation not available (130 aa)
	ENSLBEP00000038435	annotation not available (109 aa)
	ENSLBEP00000038311	Uncharacterized protein. (124 aa)
	ENSLBEP00000034550	annotation not available (252 aa)
	ENSLBEP00000030325	Uncharacterized protein. (250 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (432 aa)
	ENSLBEP00000028697	annotation not available (227 aa)
	ENSLBEP00000028223	annotation not available (109 aa)
	ENSLBEP00000026358	Uncharacterized protein. (237 aa)
	ENSLBEP00000024330	annotation not available (246 aa)
	ENSLBEP00000023261	annotation not available (109 aa)
	ENSLBEP00000023183	annotation not available (246 aa)
	ENSLBEP00000023131	Uncharacterized protein. (207 aa)
	ENSLBEP00000022957	Uncharacterized protein. (212 aa)
	ENSLBEP00000022896	Uncharacterized protein. (128 aa)
	ENSLBEP00000022391	annotation not available (248 aa)
	ENSLBEP00000021384	annotation not available (252 aa)
	ENSLBEP00000021288	annotation not available (109 aa)
	ENSLBEP00000021031	annotation not available (109 aa)
	ENSLBEP00000020859	Uncharacterized protein. (109 aa)
	ENSLBEP00000020840	Uncharacterized protein. (239 aa)
	ENSLBEP00000020286	annotation not available (109 aa)
	ENSLBEP00000020283	annotation not available (130 aa)
	ENSLBEP00000019881	Uncharacterized protein. (159 aa)
	ENSLBEP00000019858	annotation not available (109 aa)
	ENSLBEP00000019254	annotation not available (109 aa)
	ENSLBEP00000019028	Uncharacterized protein. (234 aa)
	ENSLBEP00000018592	Uncharacterized protein. (130 aa)
	ENSLBEP00000018383	annotation not available (252 aa)
	ENSLBEP00000018089	annotation not available (246 aa)
	ENSLBEP00000017435	annotation not available (246 aa)
	ENSLBEP00000017224	annotation not available (130 aa)
	ENSLBEP00000017097	Uncharacterized protein. (248 aa)
	ENSLBEP00000016122	annotation not available (109 aa)
	ENSLBEP00000016080	Uncharacterized protein. (246 aa)
	ENSLBEP00000015863	Uncharacterized protein. (246 aa)
	cav3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (152 aa)
	LOC109990113	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	ENSLBEP00000015082	Uncharacterized protein. (227 aa)
	ENSLBEP00000015001	annotation not available (109 aa)
	ENSLBEP00000014881	annotation not available (109 aa)
	ENSLBEP00000013855	annotation not available (109 aa)
	ENSLBEP00000013165	annotation not available (130 aa)
	ENSLBEP00000013078	Uncharacterized protein. (130 aa)
	ENSLBEP00000012281	annotation not available (252 aa)
	ENSLBEP00000012140	Uncharacterized protein. (246 aa)
	ENSLBEP00000011714	annotation not available (109 aa)
	ENSLBEP00000010929	Uncharacterized protein. (246 aa)
	ENSLBEP00000010178	Uncharacterized protein. (224 aa)
	ENSLBEP00000009394	annotation not available (109 aa)
	ENSLBEP00000009372	Uncharacterized protein. (226 aa)
	ENSLBEP00000008517	Uncharacterized protein. (121 aa)
	ENSLBEP00000008271	annotation not available (109 aa)
	ENSLBEP00000008048	Uncharacterized protein. (118 aa)
	ENSLBEP00000007777	Uncharacterized protein. (237 aa)
	ENSLBEP00000007571	Uncharacterized protein. (120 aa)
	ENSLBEP00000007480	annotation not available (109 aa)
	ENSLBEP00000007373	annotation not available (109 aa)
	ENSLBEP00000004878	Uncharacterized protein. (130 aa)
	ENSLBEP00000003961	annotation not available (130 aa)
	ENSLBEP00000003253	annotation not available (109 aa)
	ENSLBEP00000002967	Uncharacterized protein. (235 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2422 aa)
	ENSLBEP00000002486	Uncharacterized protein. (171 aa)
	ENSLBEP00000002292	Uncharacterized protein. (252 aa)
	ENSLBEP00000001942	annotation not available (252 aa)
	ENSLBEP00000001352	Uncharacterized protein. (251 aa)
	ENSLBEP00000001011	Uncharacterized protein. (252 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000003961	ENSLBEP00000019881	ENSLBEP00000003961	ENSLBEP00000019881	annotation not available	Uncharacterized protein.	0.463
ENSLBEP00000004878	ENSLBEP00000019881	ENSLBEP00000004878	ENSLBEP00000019881	Uncharacterized protein.	Uncharacterized protein.	0.451
ENSLBEP00000013078	ENSLBEP00000019881	ENSLBEP00000013078	ENSLBEP00000019881	Uncharacterized protein.	Uncharacterized protein.	0.463
ENSLBEP00000013165	ENSLBEP00000019881	ENSLBEP00000013165	ENSLBEP00000019881	annotation not available	Uncharacterized protein.	0.463
ENSLBEP00000017224	ENSLBEP00000019881	ENSLBEP00000017224	ENSLBEP00000019881	annotation not available	Uncharacterized protein.	0.463
ENSLBEP00000019881	ENSLBEP00000003961	ENSLBEP00000019881	ENSLBEP00000003961	Uncharacterized protein.	annotation not available	0.463
ENSLBEP00000019881	ENSLBEP00000004878	ENSLBEP00000019881	ENSLBEP00000004878	Uncharacterized protein.	Uncharacterized protein.	0.451
ENSLBEP00000019881	ENSLBEP00000013078	ENSLBEP00000019881	ENSLBEP00000013078	Uncharacterized protein.	Uncharacterized protein.	0.463
ENSLBEP00000019881	ENSLBEP00000013165	ENSLBEP00000019881	ENSLBEP00000013165	Uncharacterized protein.	annotation not available	0.463
ENSLBEP00000019881	ENSLBEP00000017224	ENSLBEP00000019881	ENSLBEP00000017224	Uncharacterized protein.	annotation not available	0.463
ENSLBEP00000019881	ENSLBEP00000020283	ENSLBEP00000019881	ENSLBEP00000020283	Uncharacterized protein.	annotation not available	0.463
ENSLBEP00000019881	ENSLBEP00000022896	ENSLBEP00000019881	ENSLBEP00000022896	Uncharacterized protein.	Uncharacterized protein.	0.421
ENSLBEP00000019881	ENSLBEP00000038683	ENSLBEP00000019881	ENSLBEP00000038683	Uncharacterized protein.	annotation not available	0.463
ENSLBEP00000019881	ENSLBEP00000038700	ENSLBEP00000019881	ENSLBEP00000038700	Uncharacterized protein.	Uncharacterized protein.	0.446
ENSLBEP00000020283	ENSLBEP00000019881	ENSLBEP00000020283	ENSLBEP00000019881	annotation not available	Uncharacterized protein.	0.463
ENSLBEP00000022896	ENSLBEP00000019881	ENSLBEP00000022896	ENSLBEP00000019881	Uncharacterized protein.	Uncharacterized protein.	0.421
ENSLBEP00000038683	ENSLBEP00000019881	ENSLBEP00000038683	ENSLBEP00000019881	annotation not available	Uncharacterized protein.	0.463
ENSLBEP00000038700	ENSLBEP00000019881	ENSLBEP00000038700	ENSLBEP00000019881	Uncharacterized protein.	Uncharacterized protein.	0.446
LOC109990113	cav3	ENSLBEP00000015571	ENSLBEP00000015590	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.937
cav3	LOC109990113	ENSLBEP00000015590	ENSLBEP00000015571	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.937