(86 nodes) Biological process involved in interaction with host network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000011687	PGRP domain-containing protein. (160 aa)
	vps37b	Zgc:114173. (285 aa)
	LOC109996245	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
	LOC110006067	Uncharacterized protein. (483 aa)
	thoc3	THO complex 3. (322 aa)
	ENSLBEP00000008403	Uncharacterized protein. (543 aa)
	LOC109984420	Si:dkey-33i11.1. (646 aa)
	ENSLBEP00000008247	Uncharacterized protein. (364 aa)
	LOC109985004	Uncharacterized protein. (372 aa)
	ENSLBEP00000008024	Uncharacterized protein. (252 aa)
	LOC109981964	Neuropilin; Belongs to the neuropilin family. (874 aa)
	LOC109978575	Uncharacterized protein. (588 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (438 aa)
	LOC109981612	Arginine vasopressin; Belongs to the vasopressin/oxytocin family. (160 aa)
	LOC109978539	Uncharacterized protein. (208 aa)
	ENSLBEP00000023618	Uncharacterized protein. (197 aa)
	ENSLBEP00000023428	Uncharacterized protein. (541 aa)
	LOC110003829	Dystroglycan 1. (890 aa)
	ddb1	Damage-specific DNA binding protein 1. (971 aa)
	ENSLBEP00000022157	Uncharacterized protein. (387 aa)
	LOC109981508	Uncharacterized protein. (280 aa)
	LOC109981531	TNFR-Cys domain-containing protein. (241 aa)
	LOC109994830	Uncharacterized protein. (227 aa)
	ENSLBEP00000020769	Peptidase S72 domain-containing protein. (893 aa)
	slc3a2	Solute carrier family 3 member 2a. (514 aa)
	pc	Pyruvate carboxylase b. (1231 aa)
	ENSLBEP00000019531	Ig-like domain-containing protein. (327 aa)
	ENSLBEP00000018630	Ig-like domain-containing protein. (283 aa)
	TPCN2	Uncharacterized protein. (809 aa)
	ENSLBEP00000018417	Uncharacterized protein. (409 aa)
	LOC110004385	TNFR-Cys domain-containing protein. (165 aa)
	ENSLBEP00000024862	Si:dkey-185p13.1. (77 aa)
	phb	Prohibitin. (271 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	LOC110005629	SIVA1, apoptosis-inducing factor. (170 aa)
	LOC109976797	TNFR-Cys domain-containing protein. (261 aa)
	ENSLBEP00000005622	Nectin cell adhesion molecule 4b. (592 aa)
	ist1	IST1 factor associated with ESCRT-III. (359 aa)
	ENSLBEP00000003027	Uncharacterized protein. (240 aa)
	LOC109983613	Ig-like domain-containing protein. (246 aa)
	ENSLBEP00000002533	Vesicle-associated membrane protein 8 (endobrevin). (119 aa)
	LOC109990188	Tumor susceptibility 101a. (422 aa)
	LOC109990192	Zgc:123278. (191 aa)
	LOC109992850	Uncharacterized protein. (599 aa)
	LOC110004603-2	Uncharacterized protein. (288 aa)
	LOC110006283	TNFR-Cys domain-containing protein. (284 aa)
	LOC110004603	Uncharacterized protein. (300 aa)
	ENSLBEP00000017646	Uncharacterized protein. (398 aa)
	ENSLBEP00000017574	Uncharacterized protein. (392 aa)
	tpcn1	Two pore segment channel 1. (820 aa)
	cxadr	CXADR Ig-like cell adhesion molecule. (375 aa)
	smpd1	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (627 aa)
	uvrag	UV radiation resistance associated gene. (734 aa)
	gas6	Growth arrest-specific 6. (627 aa)
	LOC109990113	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
	LOC110005791	Uncharacterized protein. (540 aa)
	ENSLBEP00000015160	Uncharacterized protein. (388 aa)
	LOC109980963	Peptidase S72 domain-containing protein. (910 aa)
	ENSLBEP00000014461	Uncharacterized protein. (499 aa)
	LOC109980354	Uncharacterized protein; Belongs to the CD36 family. (430 aa)
	LOC109982539	Uncharacterized protein; Belongs to the AAA ATPase family. (437 aa)
	ENSLBEP00000013819	Uncharacterized protein. (335 aa)
	LOC110003734	Two pore segment channel 3. (793 aa)
	ENSLBEP00000012344	TNFR-Cys domain-containing protein. (265 aa)
	ENSLBEP00000012316	TNFR-Cys domain-containing protein. (296 aa)
	ENSLBEP00000012259	TNFR-Cys domain-containing protein. (265 aa)
	nectin1	Nectin cell adhesion molecule 1b. (499 aa)
	ENSLBEP00000037751	Uncharacterized protein. (486 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (429 aa)
	LOC109996784	Si:dkey-202g17.3. (504 aa)
	LOC109981374	Apoptosis regulatory protein Siva-like. (170 aa)
	ENSLBEP00000033334	Uncharacterized protein. (428 aa)
	LOC109989229	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
	ENSLBEP00000032524	Uncharacterized protein. (457 aa)
	trim62	Tripartite motif containing 62, tandem duplicate 1. (475 aa)
	jpt2	Jupiter microtubule associated homolog 2. (240 aa)
	ENSLBEP00000030669	Uncharacterized protein. (112 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (1917 aa)
	ENSLBEP00000028412	Uncharacterized protein. (391 aa)
	ENSLBEP00000028393	Ig-like domain-containing protein. (316 aa)
	ENSLBEP00000026800	Uncharacterized protein. (505 aa)
	thoc1	THO complex 1. (667 aa)
	ENSLBEP00000026557	Uncharacterized protein. (622 aa)
	agtr1	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family. (364 aa)
	LOC109998842	Solute carrier family 3 member 2b. (527 aa)
	ENSLBEP00000025090	Uncharacterized protein. (324 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000002533	LOC109980354	ENSLBEP00000002533	ENSLBEP00000013933	Vesicle-associated membrane protein 8 (endobrevin).	Uncharacterized protein; Belongs to the CD36 family.	0.512
ENSLBEP00000002533	scarb1	ENSLBEP00000002533	ENSLBEP00000037100	Vesicle-associated membrane protein 8 (endobrevin).	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.512
ENSLBEP00000005622	LOC109992850	ENSLBEP00000005622	ENSLBEP00000001930	Nectin cell adhesion molecule 4b.	Uncharacterized protein.	0.845
ENSLBEP00000005622	nectin1	ENSLBEP00000005622	ENSLBEP00000037821	Nectin cell adhesion molecule 4b.	Nectin cell adhesion molecule 1b.	0.934
ENSLBEP00000008247	ENSLBEP00000014461	ENSLBEP00000008247	ENSLBEP00000014461	Uncharacterized protein.	Uncharacterized protein.	0.573
ENSLBEP00000008247	ENSLBEP00000015160	ENSLBEP00000008247	ENSLBEP00000015160	Uncharacterized protein.	Uncharacterized protein.	0.568
ENSLBEP00000008247	ENSLBEP00000017574	ENSLBEP00000008247	ENSLBEP00000017574	Uncharacterized protein.	Uncharacterized protein.	0.548
ENSLBEP00000008247	ENSLBEP00000017646	ENSLBEP00000008247	ENSLBEP00000017646	Uncharacterized protein.	Uncharacterized protein.	0.580
ENSLBEP00000008247	ENSLBEP00000018417	ENSLBEP00000008247	ENSLBEP00000018417	Uncharacterized protein.	Uncharacterized protein.	0.575
ENSLBEP00000008247	ENSLBEP00000022157	ENSLBEP00000008247	ENSLBEP00000022157	Uncharacterized protein.	Uncharacterized protein.	0.538
ENSLBEP00000008247	ENSLBEP00000026800	ENSLBEP00000008247	ENSLBEP00000026800	Uncharacterized protein.	Uncharacterized protein.	0.564
ENSLBEP00000008247	ENSLBEP00000028412	ENSLBEP00000008247	ENSLBEP00000028412	Uncharacterized protein.	Uncharacterized protein.	0.565
ENSLBEP00000008247	ENSLBEP00000033334	ENSLBEP00000008247	ENSLBEP00000033334	Uncharacterized protein.	Uncharacterized protein.	0.579
ENSLBEP00000014461	ENSLBEP00000008247	ENSLBEP00000014461	ENSLBEP00000008247	Uncharacterized protein.	Uncharacterized protein.	0.573
ENSLBEP00000014461	ENSLBEP00000032524	ENSLBEP00000014461	ENSLBEP00000032524	Uncharacterized protein.	Uncharacterized protein.	0.519
ENSLBEP00000015160	ENSLBEP00000008247	ENSLBEP00000015160	ENSLBEP00000008247	Uncharacterized protein.	Uncharacterized protein.	0.568
ENSLBEP00000017574	ENSLBEP00000008247	ENSLBEP00000017574	ENSLBEP00000008247	Uncharacterized protein.	Uncharacterized protein.	0.548
ENSLBEP00000017646	ENSLBEP00000008247	ENSLBEP00000017646	ENSLBEP00000008247	Uncharacterized protein.	Uncharacterized protein.	0.580
ENSLBEP00000018417	ENSLBEP00000008247	ENSLBEP00000018417	ENSLBEP00000008247	Uncharacterized protein.	Uncharacterized protein.	0.575
ENSLBEP00000018630	ENSLBEP00000032524	ENSLBEP00000018630	ENSLBEP00000032524	Ig-like domain-containing protein.	Uncharacterized protein.	0.470