STRINGSTRING
msx1 msx1 LOC109987676 LOC109987676 specc1l specc1l tgfb3 tgfb3 LOC110004120 LOC110004120 crispld2 crispld2 LOC109988649 LOC109988649 sgpl1 sgpl1 ENSLBEP00000028187 ENSLBEP00000028187 LOC110001878 LOC110001878 LOC110001207 LOC110001207 ENSLBEP00000000526 ENSLBEP00000000526 ep300 ep300 LOC109981295 LOC109981295 LOC109995483 LOC109995483 ENSLBEP00000022272 ENSLBEP00000022272 pitx2 pitx2 ENSLBEP00000019610 ENSLBEP00000019610 lef1 lef1 crispld1 crispld1 ankrd12 ankrd12 LOC109990758 LOC109990758 LOC114920595 LOC114920595 LOC109981886 LOC109981886 LOC109995256 LOC109995256 ankrd11 ankrd11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msx1Muscle segment homeobox 1a. (278 aa)
LOC109987676Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
specc1lSperm antigen with calponin homology and coiled-coil domains 1-like a. (1005 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC110004120E1A binding protein p300 b. (2680 aa)
crispld2Cysteine-rich secretory protein LCCL domain containing 2. (524 aa)
LOC109988649Uncharacterized protein. (627 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
ENSLBEP00000028187Asp-B-Hydro_N domain-containing protein. (203 aa)
LOC110001878Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. (512 aa)
LOC110001207Cysteine-serine-rich nuclear protein 1b. (571 aa)
ENSLBEP00000000526PH domain-containing protein. (308 aa)
ep300E1A binding protein p300 a. (2577 aa)
LOC109981295Cysteine-rich secretory protein LCCL domain containing 1b. (511 aa)
LOC109995483Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
ENSLBEP00000022272TAZ-type domain-containing protein. (362 aa)
pitx2Homeobox protein. (313 aa)
ENSLBEP00000019610Uncharacterized protein. (61 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
crispld1Cysteine-rich secretory protein LCCL domain containing 1a. (517 aa)
ankrd12Ankyrin repeat domain 12. (1951 aa)
LOC109990758Muscle segment homeobox 3. (250 aa)
LOC114920595ANK_REP_REGION domain-containing protein. (684 aa)
LOC109981886Dickkopf WNT signaling pathway inhibitor 1a. (253 aa)
LOC109995256Cysteine-serine-rich nuclear protein 1a. (510 aa)
ankrd11Ankyrin repeat domain 11. (2723 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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