(35 nodes) Mononuclear cell migration network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109993297	F11 receptor, tandem duplicate 1. (319 aa)
	ENSLBEP00000033705	Galectin. (281 aa)
	CCR6	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family. (408 aa)
	ano6	Anoctamin. (920 aa)
	ENSLBEP00000002730	C-C motif chemokine. (115 aa)
	LOC109975478	Cytochrome P450, family 7, subfamily B, polypeptide 1. (537 aa)
	ENSLBEP00000004509	Chemokine (C-C motif) receptor 6b. (305 aa)
	ccl17	SCY domain-containing protein. (98 aa)
	LOC109987769	Chemokine (C-C motif) ligand 25b. (100 aa)
	LOC110006103	CD99 molecule-like 2. (215 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (318 aa)
	tbx21	T-box transcription factor 21. (616 aa)
	LOC109996964	Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (513 aa)
	LOC109992014	Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (556 aa)
	LOC110006231	TGF_BETA_2 domain-containing protein. (224 aa)
	CKLF	Chemokine like factor. (150 aa)
	gas6	Growth arrest-specific 6. (627 aa)
	ENSLBEP00000016897	Si:dkey-237i9.8. (587 aa)
	ENSLBEP00000016916	Galectin. (136 aa)
	ENSLBEP00000018859	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (358 aa)
	ENSLBEP00000019140	Artemin a. (96 aa)
	LOC109976314	C-C motif chemokine. (103 aa)
	LOC109989114	SCY domain-containing protein. (112 aa)
	LOC109997739	CD99 molecule. (227 aa)
	LOC110003091	Galectin. (296 aa)
	crtam	Ig-like domain-containing protein. (455 aa)
	asb2	Ankyrin repeat and SOCS box containing 2b. (472 aa)
	LOC109986980	TNF superfamily member 11; Belongs to the tumor necrosis factor family. (268 aa)
	LOC109983961	Si:ch211-184m13.4; Belongs to the G-protein coupled receptor 1 family. (342 aa)
	LOC109983967	G protein-coupled receptor 183a; Belongs to the G-protein coupled receptor 1 family. (384 aa)
	LOC109993836	Platelet/endothelial cell adhesion molecule 1. (797 aa)
	crk	CRK proto-oncogene, adaptor protein. (315 aa)
	LOC110004023	Uncharacterized protein. (639 aa)
	LOC110004024	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (624 aa)
	LOC109998954	Uncharacterized protein. (322 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR6	ENSLBEP00000002730	ENSLBEP00000035647	ENSLBEP00000002730	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.900
CCR6	ENSLBEP00000004509	ENSLBEP00000035647	ENSLBEP00000004509	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) receptor 6b.	0.831
CCR6	LOC109976314	ENSLBEP00000035647	ENSLBEP00000021617	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	C-C motif chemokine.	0.834
CCR6	LOC109987769	ENSLBEP00000035647	ENSLBEP00000008897	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	Chemokine (C-C motif) ligand 25b.	0.834
CCR6	LOC109989114	ENSLBEP00000035647	ENSLBEP00000021973	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.891
CCR6	ccl17	ENSLBEP00000035647	ENSLBEP00000008696	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	SCY domain-containing protein.	0.841
ENSLBEP00000002730	CCR6	ENSLBEP00000002730	ENSLBEP00000035647	C-C motif chemokine.	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	0.900
ENSLBEP00000002730	ENSLBEP00000004509	ENSLBEP00000002730	ENSLBEP00000004509	C-C motif chemokine.	Chemokine (C-C motif) receptor 6b.	0.993
ENSLBEP00000002730	ENSLBEP00000018859	ENSLBEP00000002730	ENSLBEP00000018859	C-C motif chemokine.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900
ENSLBEP00000002730	LOC109976314	ENSLBEP00000002730	ENSLBEP00000021617	C-C motif chemokine.	C-C motif chemokine.	0.504
ENSLBEP00000002730	LOC109987769	ENSLBEP00000002730	ENSLBEP00000008897	C-C motif chemokine.	Chemokine (C-C motif) ligand 25b.	0.504
ENSLBEP00000002730	LOC109989114	ENSLBEP00000002730	ENSLBEP00000021973	C-C motif chemokine.	SCY domain-containing protein.	0.424
ENSLBEP00000004509	CCR6	ENSLBEP00000004509	ENSLBEP00000035647	Chemokine (C-C motif) receptor 6b.	C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.	0.831
ENSLBEP00000004509	ENSLBEP00000002730	ENSLBEP00000004509	ENSLBEP00000002730	Chemokine (C-C motif) receptor 6b.	C-C motif chemokine.	0.993
ENSLBEP00000004509	ENSLBEP00000018859	ENSLBEP00000004509	ENSLBEP00000018859	Chemokine (C-C motif) receptor 6b.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.831
ENSLBEP00000004509	LOC109976314	ENSLBEP00000004509	ENSLBEP00000021617	Chemokine (C-C motif) receptor 6b.	C-C motif chemokine.	0.880
ENSLBEP00000004509	LOC109987769	ENSLBEP00000004509	ENSLBEP00000008897	Chemokine (C-C motif) receptor 6b.	Chemokine (C-C motif) ligand 25b.	0.880
ENSLBEP00000004509	LOC109989114	ENSLBEP00000004509	ENSLBEP00000021973	Chemokine (C-C motif) receptor 6b.	SCY domain-containing protein.	0.907
ENSLBEP00000004509	ccl17	ENSLBEP00000004509	ENSLBEP00000008696	Chemokine (C-C motif) receptor 6b.	SCY domain-containing protein.	0.883
ENSLBEP00000016897	LOC109993297	ENSLBEP00000016897	ENSLBEP00000033502	Si:dkey-237i9.8.	F11 receptor, tandem duplicate 1.	0.589