STRINGSTRING
nop53 nop53 LOC109997614 LOC109997614 LOC109980933 LOC109980933 tnip1 tnip1 LOC109999113 LOC109999113 LOC109982948 LOC109982948 zc3h12a zc3h12a sart3 sart3 wdr20 wdr20 ubxn1 ubxn1 LOC109980837 LOC109980837 ENSLBEP00000007449 ENSLBEP00000007449 LOC109999896 LOC109999896 LOC109985574 LOC109985574
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (459 aa)
LOC109997614Deoxyribonuclease; Belongs to the DNase I family. (298 aa)
LOC109980933Endo/exonuclease/phosphatase domain-containing protein. (348 aa)
tnip1TNFAIP3 interacting protein 1. (694 aa)
LOC109999113Zinc finger CCCH-type containing 12A. (627 aa)
LOC109982948WD repeat domain 20b. (630 aa)
zc3h12aSi:dkey-206d17.12. (590 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (943 aa)
wdr20WD repeat domain 20a. (596 aa)
ubxn1UBX domain protein 1. (362 aa)
LOC109980837E3 ubiquitin-protein ligase. (867 aa)
ENSLBEP00000007449TBD domain-containing protein. (236 aa)
LOC109999896DM1 locus, WD repeat containing. (689 aa)
LOC109985574E3 ubiquitin-protein ligase. (880 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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