14 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109989134	Netrin g2a. (579 aa)
	cplx3	Complexin 3b. (156 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (910 aa)
	LOC109984480	Netrin G2. (633 aa)
	ntng1	Netrin g1a. (546 aa)
	CDH2-2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (915 aa)
	nectin1	Nectin cell adhesion molecule 1b. (499 aa)
	LOC109978841	Laminin N-terminal domain-containing protein. (314 aa)
	P2RY4	Pyrimidinergic receptor P2Y4; Belongs to the G-protein coupled receptor 1 family. (344 aa)
	nptn	Neuroplastin b. (394 aa)
	LOC110003082	Uncharacterized protein. (380 aa)
	LOC110004274	Si:ch73-330k17.3. (221 aa)
	LOC109975356	Vav 3 guanine nucleotide exchange factor b. (456 aa)
	LOC109988478	Zgc:172282. (693 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH2	CDH2-2	ENSLBEP00000023804	ENSLBEP00000037704	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.840
CDH2-2	CDH2	ENSLBEP00000037704	ENSLBEP00000023804	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.840
LOC109975356	LOC109978841	ENSLBEP00000020235	ENSLBEP00000003744	Vav 3 guanine nucleotide exchange factor b.	Laminin N-terminal domain-containing protein.	0.469
LOC109975356	LOC109984480	ENSLBEP00000020235	ENSLBEP00000031610	Vav 3 guanine nucleotide exchange factor b.	Netrin G2.	0.470
LOC109975356	LOC109988478	ENSLBEP00000020235	ENSLBEP00000023943	Vav 3 guanine nucleotide exchange factor b.	Zgc:172282.	0.792
LOC109975356	LOC109989134	ENSLBEP00000020235	ENSLBEP00000020243	Vav 3 guanine nucleotide exchange factor b.	Netrin g2a.	0.477
LOC109975356	ntng1	ENSLBEP00000020235	ENSLBEP00000033193	Vav 3 guanine nucleotide exchange factor b.	Netrin g1a.	0.665
LOC109978841	LOC109975356	ENSLBEP00000003744	ENSLBEP00000020235	Laminin N-terminal domain-containing protein.	Vav 3 guanine nucleotide exchange factor b.	0.469
LOC109978841	ntng1	ENSLBEP00000003744	ENSLBEP00000033193	Laminin N-terminal domain-containing protein.	Netrin g1a.	0.468
LOC109984480	LOC109975356	ENSLBEP00000031610	ENSLBEP00000020235	Netrin G2.	Vav 3 guanine nucleotide exchange factor b.	0.470
LOC109984480	ntng1	ENSLBEP00000031610	ENSLBEP00000033193	Netrin G2.	Netrin g1a.	0.472
LOC109988478	LOC109975356	ENSLBEP00000023943	ENSLBEP00000020235	Zgc:172282.	Vav 3 guanine nucleotide exchange factor b.	0.792
LOC109988478	ntng1	ENSLBEP00000023943	ENSLBEP00000033193	Zgc:172282.	Netrin g1a.	0.792
LOC109989134	LOC109975356	ENSLBEP00000020243	ENSLBEP00000020235	Netrin g2a.	Vav 3 guanine nucleotide exchange factor b.	0.477
LOC109989134	ntng1	ENSLBEP00000020243	ENSLBEP00000033193	Netrin g2a.	Netrin g1a.	0.475
ntng1	LOC109975356	ENSLBEP00000033193	ENSLBEP00000020235	Netrin g1a.	Vav 3 guanine nucleotide exchange factor b.	0.665
ntng1	LOC109978841	ENSLBEP00000033193	ENSLBEP00000003744	Netrin g1a.	Laminin N-terminal domain-containing protein.	0.468
ntng1	LOC109984480	ENSLBEP00000033193	ENSLBEP00000031610	Netrin g1a.	Netrin G2.	0.472
ntng1	LOC109988478	ENSLBEP00000033193	ENSLBEP00000023943	Netrin g1a.	Zgc:172282.	0.792
ntng1	LOC109989134	ENSLBEP00000033193	ENSLBEP00000020243	Netrin g1a.	Netrin g2a.	0.475