(46 nodes) Regulation of postsynapse organization network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109975219	Uncharacterized protein. (251 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2422 aa)
	LOC109984065	Peptidase_S9 domain-containing protein. (369 aa)
	LOC109986987	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a. (1889 aa)
	LOC109983038	Cell cycle associated protein 1a. (636 aa)
	cux2	Homeobox protein cut-like. (1350 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	HOMER1	Homer scaffold protein 1. (356 aa)
	LOC109999156	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2a. (1888 aa)
	LOC109984557	Caprin family member 2. (890 aa)
	LOC110004179	Uncharacterized protein. (502 aa)
	LOC110001564	Si:dkey-40c11.2. (656 aa)
	TANC2	Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2. (2083 aa)
	LOC110001447	BAI1 associated protein 2. (516 aa)
	lrrtm2	Leucine rich repeat transmembrane neuronal 2. (638 aa)
	LOC109988705	Ephrin-A1a; Belongs to the ephrin family. (227 aa)
	LOC109993319	Eukaryotic elongation factor 2 kinase. (709 aa)
	LOC109982581	Ubiquitin protein ligase E3A. (827 aa)
	LOC109987011	Cyclin-dependent kinase-like 5. (1145 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1065 aa)
	CDKL5	Cyclin dependent kinase like 5. (1027 aa)
	LOC109989743	Uncharacterized protein. (786 aa)
	LOC109994083	BAI1-associated protein 2a. (556 aa)
	LOC109980617	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (789 aa)
	LOC109982364	Leucine rich repeat and fibronectin type III domain containing 2b. (786 aa)
	LOC109982756	Abhydrolase domain containing 17A. (321 aa)
	UBE3A	Ubiquitin protein ligase E3A. (789 aa)
	LOC109983903	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (701 aa)
	dbn1	Drebrin 1. (513 aa)
	vps35	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (798 aa)
	abhd17c	Abhydrolase domain containing 17C. (294 aa)
	LOC109990231	Uncharacterized protein. (251 aa)
	LOC109991342	Leucine rich repeat and fibronectin type III domain containing 4b. (1063 aa)
	LOC109998752	Homer scaffold protein 1b. (363 aa)
	ENSLBEP00000019594	Rho GTPase activating protein 22. (383 aa)
	ENSLBEP00000019546	Uncharacterized protein. (285 aa)
	LOC109984310	Uncharacterized protein. (730 aa)
	caprin1	Cell cycle associated protein 1b. (693 aa)
	RELN	Reelin. (3414 aa)
	LOC110000499	Interleukin 1 receptor accessory protein-like 1a. (709 aa)
	ENSLBEP00000009580	Uncharacterized protein. (386 aa)
	LOC109992296	Rho GTPase activating protein 22. (755 aa)
	tanc1	Uncharacterized protein. (1933 aa)
	abhd17b	Abhydrolase domain containing 17B. (288 aa)
	efna1	Ephrin-A1b; Belongs to the ephrin family. (234 aa)
	dbnl	Drebrin-like b. (480 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000009580	LOC109994083	ENSLBEP00000009580	ENSLBEP00000028811	Uncharacterized protein.	BAI1-associated protein 2a.	0.869
ENSLBEP00000009580	LOC110001447	ENSLBEP00000009580	ENSLBEP00000036872	Uncharacterized protein.	BAI1 associated protein 2.	0.869
ENSLBEP00000019546	ENSLBEP00000019594	ENSLBEP00000019546	ENSLBEP00000019594	Uncharacterized protein.	Rho GTPase activating protein 22.	0.842
ENSLBEP00000019594	ENSLBEP00000019546	ENSLBEP00000019594	ENSLBEP00000019546	Rho GTPase activating protein 22.	Uncharacterized protein.	0.842
HOMER1	tanc1	ENSLBEP00000002162	ENSLBEP00000007909	Homer scaffold protein 1.	Uncharacterized protein.	0.423
LOC109980617	cdk5	ENSLBEP00000028145	ENSLBEP00000001893	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.442
LOC109982364	LOC109991342	ENSLBEP00000027886	ENSLBEP00000019902	Leucine rich repeat and fibronectin type III domain containing 2b.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.549
LOC109982581	UBE3A	ENSLBEP00000033424	ENSLBEP00000025631	Ubiquitin protein ligase E3A.	Ubiquitin protein ligase E3A.	0.841
LOC109983903	cdk5	ENSLBEP00000024851	ENSLBEP00000001893	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.442
LOC109984310	LOC109991342	ENSLBEP00000019244	ENSLBEP00000019902	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.488
LOC109989743	LOC109991342	ENSLBEP00000030272	ENSLBEP00000019902	Uncharacterized protein.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.549
LOC109991342	LOC109982364	ENSLBEP00000019902	ENSLBEP00000027886	Leucine rich repeat and fibronectin type III domain containing 4b.	Leucine rich repeat and fibronectin type III domain containing 2b.	0.549
LOC109991342	LOC109984310	ENSLBEP00000019902	ENSLBEP00000019244	Leucine rich repeat and fibronectin type III domain containing 4b.	Uncharacterized protein.	0.488
LOC109991342	LOC109989743	ENSLBEP00000019902	ENSLBEP00000030272	Leucine rich repeat and fibronectin type III domain containing 4b.	Uncharacterized protein.	0.549
LOC109991342	LOC110000499	ENSLBEP00000019902	ENSLBEP00000010618	Leucine rich repeat and fibronectin type III domain containing 4b.	Interleukin 1 receptor accessory protein-like 1a.	0.488
LOC109991342	LOC110004179	ENSLBEP00000019902	ENSLBEP00000037741	Leucine rich repeat and fibronectin type III domain containing 4b.	Uncharacterized protein.	0.523
LOC109994083	ENSLBEP00000009580	ENSLBEP00000028811	ENSLBEP00000009580	BAI1-associated protein 2a.	Uncharacterized protein.	0.869
LOC109994083	LOC110001447	ENSLBEP00000028811	ENSLBEP00000036872	BAI1-associated protein 2a.	BAI1 associated protein 2.	0.841
LOC109998752	tanc1	ENSLBEP00000019729	ENSLBEP00000007909	Homer scaffold protein 1b.	Uncharacterized protein.	0.423
LOC110000499	LOC109991342	ENSLBEP00000010618	ENSLBEP00000019902	Interleukin 1 receptor accessory protein-like 1a.	Leucine rich repeat and fibronectin type III domain containing 4b.	0.488