(41 nodes) Ligand-gated calcium channel activity network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109983881	Inositol 1,4,5-trisphosphate receptor, type 1b. (2690 aa)
	ENSLBEP00000024500	annotation not available (146 aa)
	LOC109994116	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca. (1391 aa)
	ENSLBEP00000005858	Uncharacterized protein. (1010 aa)
	ENSLBEP00000006079	Uncharacterized protein. (304 aa)
	ENSLBEP00000007700	PKD_channel domain-containing protein. (363 aa)
	LOC109988253	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1342 aa)
	LOC109993012	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (418 aa)
	ENSLBEP00000012830	Ins145_P3_rec domain-containing protein. (125 aa)
	LOC110003734	Two pore segment channel 3. (793 aa)
	ENSLBEP00000013648	Ins145_P3_rec domain-containing protein. (146 aa)
	LOC110004577	Inositol 1,4,5-trisphosphate receptor, type 3. (1352 aa)
	tpcn1	Two pore segment channel 1. (820 aa)
	MCOLN3	Mucolipin 3. (549 aa)
	TPCN2	Uncharacterized protein. (809 aa)
	ENSLBEP00000018645	Ins145_P3_rec domain-containing protein. (129 aa)
	ryr3	Ryanodine receptor 3. (4267 aa)
	trpa1	Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family. (1119 aa)
	LOC109993686	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b. (1831 aa)
	itpr1	Inositol 1,4,5-trisphosphate receptor, type 1a. (2706 aa)
	LOC109995464	Ryanodine receptor 1b (skeletal). (4954 aa)
	LOC109975994	Ion_trans domain-containing protein. (268 aa)
	LOC109984974	Mucolipin 3a. (549 aa)
	LOC110003801	Inositol 1,4,5-trisphosphate receptor, type 2. (2003 aa)
	LOC109996839	Transient receptor potential cation channel, subfamily M, member 2. (989 aa)
	ENSLBEP00000003437	LSDAT_euk domain-containing protein. (190 aa)
	ENSLBEP00000003498	Ion_trans domain-containing protein. (245 aa)
	grin2a	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a. (1433 aa)
	TRPM4	Transient receptor potential cation channel subfamily M member 4. (1106 aa)
	ENSLBEP00000038186	Ion_trans domain-containing protein. (469 aa)
	RYR2	Uncharacterized protein. (4797 aa)
	LOC109981873	Uncharacterized protein. (1391 aa)
	mcoln2	Mucolipin 2. (563 aa)
	mcoln1	Mucolipin 1b. (563 aa)
	RYR3	Ryanodine receptor 3. (4726 aa)
	LOC109990933	Transient receptor potential cation channel, subfamily M, member 5. (1095 aa)
	LOC109989045	Histidine rich calcium binding protein. (1261 aa)
	ENSLBEP00000031942	Uncharacterized protein. (631 aa)
	ENSLBEP00000031813	Ins145_P3_rec domain-containing protein. (164 aa)
	ENSLBEP00000026089	ANF_receptor domain-containing protein. (320 aa)
	LOC109987903	Ryanodine receptor 2b (cardiac). (3910 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000003437	ENSLBEP00000003498	ENSLBEP00000003437	ENSLBEP00000003498	LSDAT_euk domain-containing protein.	Ion_trans domain-containing protein.	0.983
ENSLBEP00000003437	ENSLBEP00000006079	ENSLBEP00000003437	ENSLBEP00000006079	LSDAT_euk domain-containing protein.	Uncharacterized protein.	0.607
ENSLBEP00000003437	ENSLBEP00000007700	ENSLBEP00000003437	ENSLBEP00000007700	LSDAT_euk domain-containing protein.	PKD_channel domain-containing protein.	0.607
ENSLBEP00000003437	LOC109975994	ENSLBEP00000003437	ENSLBEP00000022846	LSDAT_euk domain-containing protein.	Ion_trans domain-containing protein.	0.948
ENSLBEP00000003437	LOC109984974	ENSLBEP00000003437	ENSLBEP00000022175	LSDAT_euk domain-containing protein.	Mucolipin 3a.	0.607
ENSLBEP00000003437	LOC109989045	ENSLBEP00000003437	ENSLBEP00000032843	LSDAT_euk domain-containing protein.	Histidine rich calcium binding protein.	0.504
ENSLBEP00000003437	LOC109990933	ENSLBEP00000003437	ENSLBEP00000034763	LSDAT_euk domain-containing protein.	Transient receptor potential cation channel, subfamily M, member 5.	0.504
ENSLBEP00000003437	LOC109996839	ENSLBEP00000003437	ENSLBEP00000003311	LSDAT_euk domain-containing protein.	Transient receptor potential cation channel, subfamily M, member 2.	0.845
ENSLBEP00000003437	MCOLN3	ENSLBEP00000003437	ENSLBEP00000017567	LSDAT_euk domain-containing protein.	Mucolipin 3.	0.607
ENSLBEP00000003437	TRPM4	ENSLBEP00000003437	ENSLBEP00000003860	LSDAT_euk domain-containing protein.	Transient receptor potential cation channel subfamily M member 4.	0.516
ENSLBEP00000003437	mcoln1	ENSLBEP00000003437	ENSLBEP00000035939	LSDAT_euk domain-containing protein.	Mucolipin 1b.	0.607
ENSLBEP00000003437	mcoln2	ENSLBEP00000003437	ENSLBEP00000036154	LSDAT_euk domain-containing protein.	Mucolipin 2.	0.607
ENSLBEP00000003437	trpa1	ENSLBEP00000003437	ENSLBEP00000019399	LSDAT_euk domain-containing protein.	Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.	0.798
ENSLBEP00000003498	ENSLBEP00000003437	ENSLBEP00000003498	ENSLBEP00000003437	Ion_trans domain-containing protein.	LSDAT_euk domain-containing protein.	0.983
ENSLBEP00000003498	ENSLBEP00000006079	ENSLBEP00000003498	ENSLBEP00000006079	Ion_trans domain-containing protein.	Uncharacterized protein.	0.607
ENSLBEP00000003498	ENSLBEP00000007700	ENSLBEP00000003498	ENSLBEP00000007700	Ion_trans domain-containing protein.	PKD_channel domain-containing protein.	0.607
ENSLBEP00000003498	LOC109975994	ENSLBEP00000003498	ENSLBEP00000022846	Ion_trans domain-containing protein.	Ion_trans domain-containing protein.	0.519
ENSLBEP00000003498	LOC109984974	ENSLBEP00000003498	ENSLBEP00000022175	Ion_trans domain-containing protein.	Mucolipin 3a.	0.607
ENSLBEP00000003498	LOC109989045	ENSLBEP00000003498	ENSLBEP00000032843	Ion_trans domain-containing protein.	Histidine rich calcium binding protein.	0.514
ENSLBEP00000003498	LOC109990933	ENSLBEP00000003498	ENSLBEP00000034763	Ion_trans domain-containing protein.	Transient receptor potential cation channel, subfamily M, member 5.	0.504