32 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	c1qbp	Complement component 1, q subcomponent binding protein. (288 aa)
	LOC109995395	Uncharacterized protein. (191 aa)
	lrrc45	Leucine rich repeat containing 45. (675 aa)
	ENSLBEP00000015321	LIM domain-containing protein. (331 aa)
	CDC42	Cell division cycle 42. (203 aa)
	LOC109981367	Si:ch211-173a9.6. (470 aa)
	LOC109981363	Olfactomedin-like domain-containing protein. (456 aa)
	LOC109982419	Neural_ProG_Cyt domain-containing protein. (654 aa)
	cib1	Calcium and integrin binding 1 (calmyrin). (189 aa)
	ILK	Integrin linked kinase. (452 aa)
	LOC109997465	Testis associated actin remodelling kinase 2. (626 aa)
	myadm	Si:dkeyp-66d1.7. (293 aa)
	LOC110001013	Zgc:77748. (268 aa)
	LOC109981964	Neuropilin; Belongs to the neuropilin family. (874 aa)
	LOC109991911	Uncharacterized protein. (261 aa)
	cass4	Cas scaffold protein family member 4. (795 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (318 aa)
	LOC109977712	LIM domain-containing protein. (338 aa)
	LOC109994148	Cell division cycle 42. (191 aa)
	rreb1	Ras responsive element binding protein 1a. (1593 aa)
	LOC109986764	Uncharacterized protein. (282 aa)
	ENSLBEP00000019426	Uncharacterized protein. (273 aa)
	LOC109999485	Uncharacterized protein. (284 aa)
	dab2	DAB adaptor protein 2. (764 aa)
	LOC109988663	Protein S100; Belongs to the S-100 family. (100 aa)
	LOC109998954	Uncharacterized protein. (322 aa)
	crk	CRK proto-oncogene, adaptor protein. (315 aa)
	LOC110003296	Uncharacterized protein. (138 aa)
	LOC109986872	Testis associated actin remodelling kinase 1. (731 aa)
	LOC109988384	Uncharacterized protein. (452 aa)
	LOC109989361	LIM domain-containing protein. (397 aa)
	cspg5	Chondroitin sulfate proteoglycan 5a. (614 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ILK	ENSLBEP00000014221	ENSLBEP00000004872	Cell division cycle 42.	Integrin linked kinase.	0.478
CDC42	LOC109981964	ENSLBEP00000014221	ENSLBEP00000007426	Cell division cycle 42.	Neuropilin; Belongs to the neuropilin family.	0.406
CDC42	LOC109988384	ENSLBEP00000014221	ENSLBEP00000017014	Cell division cycle 42.	Uncharacterized protein.	0.478
CDC42	LOC109995395	ENSLBEP00000014221	ENSLBEP00000015957	Cell division cycle 42.	Uncharacterized protein.	0.815
CDC42	LOC109998954	ENSLBEP00000014221	ENSLBEP00000032820	Cell division cycle 42.	Uncharacterized protein.	0.540
CDC42	LOC110003296	ENSLBEP00000014221	ENSLBEP00000030398	Cell division cycle 42.	Uncharacterized protein.	0.816
CDC42	c1qbp	ENSLBEP00000014221	ENSLBEP00000007434	Cell division cycle 42.	Complement component 1, q subcomponent binding protein.	0.450
CDC42	cass4	ENSLBEP00000014221	ENSLBEP00000012722	Cell division cycle 42.	Cas scaffold protein family member 4.	0.450
CDC42	crk	ENSLBEP00000014221	ENSLBEP00000030787	Cell division cycle 42.	CRK proto-oncogene, adaptor protein.	0.540
CDC42	crkl	ENSLBEP00000014221	ENSLBEP00000012981	Cell division cycle 42.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.540
CDC42	lrrc45	ENSLBEP00000014221	ENSLBEP00000035656	Cell division cycle 42.	Leucine rich repeat containing 45.	0.718
ENSLBEP00000015321	ILK	ENSLBEP00000015321	ENSLBEP00000004872	LIM domain-containing protein.	Integrin linked kinase.	0.967
ENSLBEP00000015321	LOC109988384	ENSLBEP00000015321	ENSLBEP00000017014	LIM domain-containing protein.	Uncharacterized protein.	0.967
ILK	CDC42	ENSLBEP00000004872	ENSLBEP00000014221	Integrin linked kinase.	Cell division cycle 42.	0.478
ILK	ENSLBEP00000015321	ENSLBEP00000004872	ENSLBEP00000015321	Integrin linked kinase.	LIM domain-containing protein.	0.967
ILK	LOC109977712	ENSLBEP00000004872	ENSLBEP00000013040	Integrin linked kinase.	LIM domain-containing protein.	0.967
ILK	LOC109988384	ENSLBEP00000004872	ENSLBEP00000017014	Integrin linked kinase.	Uncharacterized protein.	0.840
ILK	LOC109989361	ENSLBEP00000004872	ENSLBEP00000037460	Integrin linked kinase.	LIM domain-containing protein.	0.967
ILK	LOC109994148	ENSLBEP00000004872	ENSLBEP00000013739	Integrin linked kinase.	Cell division cycle 42.	0.478
ILK	LOC109995395	ENSLBEP00000004872	ENSLBEP00000015957	Integrin linked kinase.	Uncharacterized protein.	0.430