(23 nodes) Regulation of p38MAPK cascade network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (956 aa)
	LOC109995595	Uncharacterized protein. (994 aa)
	ENSLBEP00000027326	Uncharacterized protein. (478 aa)
	ENSLBEP00000027248	Uncharacterized protein. (355 aa)
	LOC109985782	Bone morphogenetic protein 16. (520 aa)
	sash1	SAM and SH3 domain containing 1a. (1221 aa)
	LOC109975168	Neutrophil cytosolic factor 1. (415 aa)
	mfhas1	Malignant fibrous histiocytoma amplified sequence 1. (1024 aa)
	LOC109977468	SAM and SH3 domain containing 1b. (1110 aa)
	LOC109991015	Si:dkey-175m17.7. (883 aa)
	ENSLBEP00000009522	Protein kinase domain-containing protein. (94 aa)
	dusp10	Dual specificity phosphatase 10. (469 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1594 aa)
	LOC109998146	Uncharacterized protein. (161 aa)
	LOC109985686	Ribosomal_L7Ae domain-containing protein. (140 aa)
	LOC109985682	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1. (154 aa)
	LOC109983871-2	Cylindromatosis (turban tumor syndrome), b. (705 aa)
	zc3h12a	Si:dkey-206d17.12. (590 aa)
	gadd45g	Growth arrest and DNA-damage-inducible, gamma a. (159 aa)
	bmp4	Bone morphogenetic protein 4. (403 aa)
	rell1	RELT like 1. (253 aa)
	LOC109999113	Zinc finger CCCH-type containing 12A. (627 aa)
	LOC110000260	Neutrophil cytosol factor 1-like. (415 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000027248	ENSLBEP00000027326	ENSLBEP00000027248	ENSLBEP00000027326	Uncharacterized protein.	Uncharacterized protein.	0.948
ENSLBEP00000027248	LOC109985682	ENSLBEP00000027248	ENSLBEP00000023030	Uncharacterized protein.	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1.	0.900
ENSLBEP00000027248	LOC109985686	ENSLBEP00000027248	ENSLBEP00000023047	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.900
ENSLBEP00000027248	gadd45g	ENSLBEP00000027248	ENSLBEP00000005533	Uncharacterized protein.	Growth arrest and DNA-damage-inducible, gamma a.	0.922
ENSLBEP00000027248	rell1	ENSLBEP00000027248	ENSLBEP00000038056	Uncharacterized protein.	RELT like 1.	0.637
ENSLBEP00000027326	ENSLBEP00000027248	ENSLBEP00000027326	ENSLBEP00000027248	Uncharacterized protein.	Uncharacterized protein.	0.948
ENSLBEP00000027326	LOC109985682	ENSLBEP00000027326	ENSLBEP00000023030	Uncharacterized protein.	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1.	0.900
ENSLBEP00000027326	LOC109985686	ENSLBEP00000027326	ENSLBEP00000023047	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.900
ENSLBEP00000027326	gadd45g	ENSLBEP00000027326	ENSLBEP00000005533	Uncharacterized protein.	Growth arrest and DNA-damage-inducible, gamma a.	0.922
ENSLBEP00000027326	rell1	ENSLBEP00000027326	ENSLBEP00000038056	Uncharacterized protein.	RELT like 1.	0.637
LOC109983871-2	LOC109995595	ENSLBEP00000023025	ENSLBEP00000029408	Cylindromatosis (turban tumor syndrome), b.	Uncharacterized protein.	0.851
LOC109983871-2	cyld	ENSLBEP00000023025	ENSLBEP00000030547	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.848
LOC109985682	ENSLBEP00000027248	ENSLBEP00000023030	ENSLBEP00000027248	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1.	Uncharacterized protein.	0.900
LOC109985682	ENSLBEP00000027326	ENSLBEP00000023030	ENSLBEP00000027326	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1.	Uncharacterized protein.	0.900
LOC109985682	map3k4	ENSLBEP00000023030	ENSLBEP00000015271	Growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1.	Mitogen-activated protein kinase kinase kinase 4.	0.900
LOC109985686	ENSLBEP00000027248	ENSLBEP00000023047	ENSLBEP00000027248	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.900
LOC109985686	ENSLBEP00000027326	ENSLBEP00000023047	ENSLBEP00000027326	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.900
LOC109985686	map3k4	ENSLBEP00000023047	ENSLBEP00000015271	Ribosomal_L7Ae domain-containing protein.	Mitogen-activated protein kinase kinase kinase 4.	0.900
LOC109985782	bmp4	ENSLBEP00000026844	ENSLBEP00000038352	Bone morphogenetic protein 16.	Bone morphogenetic protein 4.	0.828
LOC109995595	LOC109983871-2	ENSLBEP00000029408	ENSLBEP00000023025	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.851