STRINGSTRING
ppargc1a ppargc1a LOC109994931 LOC109994931 LOC109996690 LOC109996690 opn3 opn3 prelid1 prelid1 ENSLBEP00000021554 ENSLBEP00000021554 pink1 pink1 fam214a fam214a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppargc1aPeroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (989 aa)
LOC109994931PRELI/MSF1 domain-containing protein. (267 aa)
LOC109996690Survival of motor neuron 1, telomeric. (284 aa)
opn3Opsin 3. (389 aa)
prelid1PRELI domain containing 1a. (210 aa)
ENSLBEP00000021554Nuclear protein 1a. (67 aa)
pink1PTEN induced kinase 1. (575 aa)
fam214aFamily with sequence similarity 214 member A. (1097 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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