STRINGSTRING
cdc40 cdc40 ppil1 ppil1 LOC110003015 LOC110003015 ENSLBEP00000021437 ENSLBEP00000021437 ift140 ift140 mks1 mks1 LOC109985173 LOC109985173 tbc1d23 tbc1d23 LOC109997314 LOC109997314
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdc40Cell division cycle 40 homolog (S. cerevisiae). (561 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (168 aa)
LOC110003015Ribosomal protein L10. (204 aa)
ENSLBEP00000021437Uncharacterized protein. (247 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1447 aa)
mks1MKS transition zone complex subunit 1. (564 aa)
LOC109985173Homeobox protein engrailed-like. (292 aa)
tbc1d23TBC1 domain family, member 23. (696 aa)
LOC109997314Homeobox protein engrailed-like. (285 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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